Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav6d-7A0A075B6B0 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav6d-7A0A075B6B0 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav6d-7A0A075B6B0 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav6d-7A0A075B6B0 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav6d-7A0A075B6B0 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC11.34□□□□□ -0.59
Trav6d-7A0A075B6B0 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC11.34□□□□□ -0.59
Trav6d-7A0A075B6B0 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav6d-7A0A075B6B0 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav6d-7A0A075B6B0 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav6d-7A0A075B6B0 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav6d-7A0A075B6B0 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav6d-7A0A075B6B0 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC11.34□□□□□ -0.59
Trav6d-7A0A075B6B0 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav6d-7A0A075B6B0 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav6d-7A0A075B6B0 Gm37153-201ENSMUST00000193637 231 ntBASIC11.34□□□□□ -0.59
Trav6d-7A0A075B6B0 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav6d-7A0A075B6B0 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav6d-7A0A075B6B0 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav6d-7A0A075B6B0 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav6d-7A0A075B6B0 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav6d-7A0A075B6B0 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav6d-7A0A075B6B0 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav6d-7A0A075B6B0 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav6d-7A0A075B6B0 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav6d-7A0A075B6B0 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav6d-7A0A075B6B0 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav6d-7A0A075B6B0 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav6d-7A0A075B6B0 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav6d-7A0A075B6B0 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC11.33□□□□□ -0.59
Trav6d-7A0A075B6B0 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav6d-7A0A075B6B0 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav6d-7A0A075B6B0 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC11.33□□□□□ -0.6
Trav6d-7A0A075B6B0 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
Trav6d-7A0A075B6B0 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav6d-7A0A075B6B0 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav6d-7A0A075B6B0 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav6d-7A0A075B6B0 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Trav6d-7A0A075B6B0 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav6d-7A0A075B6B0 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav6d-7A0A075B6B0 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav6d-7A0A075B6B0 Gm15358-201ENSMUST00000119249 520 ntBASIC11.33□□□□□ -0.6
Trav6d-7A0A075B6B0 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Trav6d-7A0A075B6B0 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC11.33□□□□□ -0.6
Trav6d-7A0A075B6B0 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC11.33□□□□□ -0.6
Trav6d-7A0A075B6B0 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC11.33□□□□□ -0.6
Trav6d-7A0A075B6B0 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC11.33□□□□□ -0.6
Trav6d-7A0A075B6B0 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC11.33□□□□□ -0.6
Trav6d-7A0A075B6B0 Gm43332-201ENSMUST00000202511 1044 ntBASIC11.33□□□□□ -0.6
Trav6d-7A0A075B6B0 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC11.33□□□□□ -0.6
Trav6d-7A0A075B6B0 AC093926.2-201ENSMUST00000214468 1228 ntBASIC11.33□□□□□ -0.6
Trav6d-7A0A075B6B0 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav6d-7A0A075B6B0 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav6d-7A0A075B6B0 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav6d-7A0A075B6B0 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav6d-7A0A075B6B0 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav6d-7A0A075B6B0 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Trav6d-7A0A075B6B0 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Trav6d-7A0A075B6B0 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC11.33□□□□□ -0.6
Trav6d-7A0A075B6B0 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav6d-7A0A075B6B0 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav6d-7A0A075B6B0 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav6d-7A0A075B6B0 Gm44645-201ENSMUST00000205492 1653 ntBASIC11.33□□□□□ -0.6
Trav6d-7A0A075B6B0 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav6d-7A0A075B6B0 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav6d-7A0A075B6B0 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav6d-7A0A075B6B0 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Trav6d-7A0A075B6B0 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC11.33□□□□□ -0.6
Trav6d-7A0A075B6B0 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav6d-7A0A075B6B0 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav6d-7A0A075B6B0 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav6d-7A0A075B6B0 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav6d-7A0A075B6B0 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6d-7A0A075B6B0 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6d-7A0A075B6B0 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6d-7A0A075B6B0 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6d-7A0A075B6B0 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6d-7A0A075B6B0 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC11.32□□□□□ -0.6
Trav6d-7A0A075B6B0 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6d-7A0A075B6B0 Celf4-206ENSMUST00000224553 1729 ntBASIC11.32□□□□□ -0.6
Trav6d-7A0A075B6B0 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6d-7A0A075B6B0 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6d-7A0A075B6B0 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6d-7A0A075B6B0 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6d-7A0A075B6B0 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6d-7A0A075B6B0 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6d-7A0A075B6B0 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6d-7A0A075B6B0 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Trav6d-7A0A075B6B0 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC11.32□□□□□ -0.6
Trav6d-7A0A075B6B0 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Trav6d-7A0A075B6B0 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC11.32□□□□□ -0.6
Trav6d-7A0A075B6B0 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6d-7A0A075B6B0 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6d-7A0A075B6B0 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Trav6d-7A0A075B6B0 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC11.32□□□□□ -0.6
Trav6d-7A0A075B6B0 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC11.32□□□□□ -0.6
Trav6d-7A0A075B6B0 Gm9727-201ENSMUST00000161387 555 ntBASIC11.32□□□□□ -0.6
Trav6d-7A0A075B6B0 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Trav6d-7A0A075B6B0 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC11.32□□□□□ -0.6
Trav6d-7A0A075B6B0 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms