Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav16A0A075B653 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav16A0A075B653 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav16A0A075B653 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav16A0A075B653 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav16A0A075B653 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC11.34□□□□□ -0.59
Trav16A0A075B653 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav16A0A075B653 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav16A0A075B653 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav16A0A075B653 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav16A0A075B653 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC11.34□□□□□ -0.59
Trav16A0A075B653 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav16A0A075B653 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC11.33□□□□□ -0.6
Trav16A0A075B653 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav16A0A075B653 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav16A0A075B653 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Trav16A0A075B653 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav16A0A075B653 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Trav16A0A075B653 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav16A0A075B653 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav16A0A075B653 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Trav16A0A075B653 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav16A0A075B653 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Trav16A0A075B653 Gm12497-201ENSMUST00000138778 237 ntBASIC11.33□□□□□ -0.6
Trav16A0A075B653 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav16A0A075B653 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC11.33□□□□□ -0.6
Trav16A0A075B653 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav16A0A075B653 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Trav16A0A075B653 Gm10313-201ENSMUST00000095320 1002 ntBASIC11.33□□□□□ -0.6
Trav16A0A075B653 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav16A0A075B653 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Trav16A0A075B653 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav16A0A075B653 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav16A0A075B653 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav16A0A075B653 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Trav16A0A075B653 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Trav16A0A075B653 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav16A0A075B653 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav16A0A075B653 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Trav16A0A075B653 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav16A0A075B653 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav16A0A075B653 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav16A0A075B653 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC11.33□□□□□ -0.6
Trav16A0A075B653 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav16A0A075B653 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav16A0A075B653 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav16A0A075B653 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav16A0A075B653 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav16A0A075B653 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav16A0A075B653 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav16A0A075B653 AC157650.3-201ENSMUST00000225058 1476 ntBASIC11.32□□□□□ -0.6
Trav16A0A075B653 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav16A0A075B653 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC11.32□□□□□ -0.6
Trav16A0A075B653 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav16A0A075B653 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC11.32□□□□□ -0.6
Trav16A0A075B653 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav16A0A075B653 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Trav16A0A075B653 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav16A0A075B653 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC11.32□□□□□ -0.6
Trav16A0A075B653 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav16A0A075B653 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav16A0A075B653 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav16A0A075B653 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav16A0A075B653 Gm25745-201ENSMUST00000174945 133 ntBASIC11.32□□□□□ -0.6
Trav16A0A075B653 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC11.32□□□□□ -0.6
Trav16A0A075B653 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC11.32□□□□□ -0.6
Trav16A0A075B653 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC11.32□□□□□ -0.6
Trav16A0A075B653 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav16A0A075B653 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav16A0A075B653 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav16A0A075B653 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Trav16A0A075B653 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav16A0A075B653 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav16A0A075B653 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav16A0A075B653 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC11.32□□□□□ -0.6
Trav16A0A075B653 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav16A0A075B653 Gm44981-201ENSMUST00000205549 1943 ntBASIC11.32□□□□□ -0.6
Trav16A0A075B653 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav16A0A075B653 Gm8258-201ENSMUST00000055593 1449 ntBASIC11.32□□□□□ -0.6
Trav16A0A075B653 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Trav16A0A075B653 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav16A0A075B653 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav16A0A075B653 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav16A0A075B653 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
Trav16A0A075B653 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav16A0A075B653 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav16A0A075B653 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Trav16A0A075B653 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav16A0A075B653 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav16A0A075B653 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Trav16A0A075B653 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav16A0A075B653 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav16A0A075B653 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC11.31□□□□□ -0.6
Trav16A0A075B653 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav16A0A075B653 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav16A0A075B653 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav16A0A075B653 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav16A0A075B653 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Trav16A0A075B653 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav16A0A075B653 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms