Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav5-4A0A075B652 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav5-4A0A075B652 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC12.27□□□□□ -0.44
Trav5-4A0A075B652 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav5-4A0A075B652 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.44
Trav5-4A0A075B652 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
Trav5-4A0A075B652 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav5-4A0A075B652 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav5-4A0A075B652 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav5-4A0A075B652 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav5-4A0A075B652 Gm28659-201ENSMUST00000188013 759 ntBASIC12.27□□□□□ -0.45
Trav5-4A0A075B652 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC12.27□□□□□ -0.45
Trav5-4A0A075B652 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav5-4A0A075B652 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav5-4A0A075B652 AV026068-213ENSMUST00000223675 1171 ntBASIC12.27□□□□□ -0.45
Trav5-4A0A075B652 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav5-4A0A075B652 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Trav5-4A0A075B652 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav5-4A0A075B652 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav5-4A0A075B652 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Trav5-4A0A075B652 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Trav5-4A0A075B652 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav5-4A0A075B652 Gm38391-201ENSMUST00000191720 4069 ntBASIC12.27□□□□□ -0.45
Trav5-4A0A075B652 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav5-4A0A075B652 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav5-4A0A075B652 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Trav5-4A0A075B652 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav5-4A0A075B652 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav5-4A0A075B652 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav5-4A0A075B652 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav5-4A0A075B652 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav5-4A0A075B652 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Trav5-4A0A075B652 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav5-4A0A075B652 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Trav5-4A0A075B652 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav5-4A0A075B652 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav5-4A0A075B652 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav5-4A0A075B652 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav5-4A0A075B652 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav5-4A0A075B652 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav5-4A0A075B652 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav5-4A0A075B652 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav5-4A0A075B652 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav5-4A0A075B652 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav5-4A0A075B652 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav5-4A0A075B652 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav5-4A0A075B652 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav5-4A0A075B652 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav5-4A0A075B652 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav5-4A0A075B652 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav5-4A0A075B652 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav5-4A0A075B652 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav5-4A0A075B652 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav5-4A0A075B652 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav5-4A0A075B652 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav5-4A0A075B652 Gm13884-201ENSMUST00000118103 829 ntBASIC12.26□□□□□ -0.45
Trav5-4A0A075B652 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC12.26□□□□□ -0.45
Trav5-4A0A075B652 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC12.26□□□□□ -0.45
Trav5-4A0A075B652 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Trav5-4A0A075B652 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC12.26□□□□□ -0.45
Trav5-4A0A075B652 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav5-4A0A075B652 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav5-4A0A075B652 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav5-4A0A075B652 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav5-4A0A075B652 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav5-4A0A075B652 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav5-4A0A075B652 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav5-4A0A075B652 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav5-4A0A075B652 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav5-4A0A075B652 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav5-4A0A075B652 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav5-4A0A075B652 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav5-4A0A075B652 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Trav5-4A0A075B652 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav5-4A0A075B652 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav5-4A0A075B652 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC12.26□□□□□ -0.45
Trav5-4A0A075B652 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav5-4A0A075B652 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav5-4A0A075B652 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav5-4A0A075B652 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav5-4A0A075B652 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav5-4A0A075B652 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Trav5-4A0A075B652 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Trav5-4A0A075B652 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav5-4A0A075B652 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav5-4A0A075B652 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav5-4A0A075B652 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav5-4A0A075B652 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav5-4A0A075B652 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav5-4A0A075B652 Gm6184-201ENSMUST00000120403 1261 ntBASIC12.25□□□□□ -0.45
Trav5-4A0A075B652 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav5-4A0A075B652 Gm4899-201ENSMUST00000178708 719 ntBASIC12.25□□□□□ -0.45
Trav5-4A0A075B652 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC12.25□□□□□ -0.45
Trav5-4A0A075B652 AC164567.1-201ENSMUST00000219185 960 ntBASIC12.25□□□□□ -0.45
Trav5-4A0A075B652 Gm18246-201ENSMUST00000221023 728 ntBASIC12.25□□□□□ -0.45
Trav5-4A0A075B652 CT010506.4-201ENSMUST00000225457 351 ntBASIC12.25□□□□□ -0.45
Trav5-4A0A075B652 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav5-4A0A075B652 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav5-4A0A075B652 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC12.25□□□□□ -0.45
Trav5-4A0A075B652 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms