Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Trav8-1A0A075B641 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC10.52□□□□□ -0.73
Trav8-1A0A075B641 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC10.52□□□□□ -0.73
Trav8-1A0A075B641 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC10.52□□□□□ -0.73
Trav8-1A0A075B641 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Trav8-1A0A075B641 AC122351.1-201ENSMUST00000220467 126 ntBASIC10.52□□□□□ -0.73
Trav8-1A0A075B641 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Trav8-1A0A075B641 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav8-1A0A075B641 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav8-1A0A075B641 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Trav8-1A0A075B641 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav8-1A0A075B641 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Trav8-1A0A075B641 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav8-1A0A075B641 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Trav8-1A0A075B641 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Trav8-1A0A075B641 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav8-1A0A075B641 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Trav8-1A0A075B641 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav8-1A0A075B641 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC10.52□□□□□ -0.73
Trav8-1A0A075B641 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Trav8-1A0A075B641 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav8-1A0A075B641 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav8-1A0A075B641 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC10.52□□□□□ -0.73
Trav8-1A0A075B641 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav8-1A0A075B641 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Trav8-1A0A075B641 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav8-1A0A075B641 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC10.51□□□□□ -0.73
Trav8-1A0A075B641 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Trav8-1A0A075B641 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav8-1A0A075B641 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav8-1A0A075B641 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trav8-1A0A075B641 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav8-1A0A075B641 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC10.51□□□□□ -0.73
Trav8-1A0A075B641 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav8-1A0A075B641 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav8-1A0A075B641 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trav8-1A0A075B641 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Trav8-1A0A075B641 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav8-1A0A075B641 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav8-1A0A075B641 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav8-1A0A075B641 Gm12669-201ENSMUST00000122162 1009 ntBASIC10.51□□□□□ -0.73
Trav8-1A0A075B641 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trav8-1A0A075B641 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trav8-1A0A075B641 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trav8-1A0A075B641 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC10.51□□□□□ -0.73
Trav8-1A0A075B641 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav8-1A0A075B641 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav8-1A0A075B641 Gm10812-201ENSMUST00000099864 546 ntBASIC10.51□□□□□ -0.73
Trav8-1A0A075B641 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav8-1A0A075B641 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Trav8-1A0A075B641 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav8-1A0A075B641 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav8-1A0A075B641 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav8-1A0A075B641 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav8-1A0A075B641 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav8-1A0A075B641 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav8-1A0A075B641 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trav8-1A0A075B641 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav8-1A0A075B641 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav8-1A0A075B641 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav8-1A0A075B641 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav8-1A0A075B641 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav8-1A0A075B641 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav8-1A0A075B641 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Trav8-1A0A075B641 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav8-1A0A075B641 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav8-1A0A075B641 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC10.51□□□□□ -0.73
Trav8-1A0A075B641 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC10.51□□□□□ -0.73
Trav8-1A0A075B641 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trav8-1A0A075B641 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav8-1A0A075B641 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav8-1A0A075B641 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC10.51□□□□□ -0.73
Trav8-1A0A075B641 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav8-1A0A075B641 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav8-1A0A075B641 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav8-1A0A075B641 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Trav8-1A0A075B641 Gm44645-201ENSMUST00000205492 1653 ntBASIC10.5□□□□□ -0.73
Trav8-1A0A075B641 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav8-1A0A075B641 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC10.5□□□□□ -0.73
Trav8-1A0A075B641 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav8-1A0A075B641 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav8-1A0A075B641 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav8-1A0A075B641 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav8-1A0A075B641 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav8-1A0A075B641 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav8-1A0A075B641 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav8-1A0A075B641 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav8-1A0A075B641 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav8-1A0A075B641 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav8-1A0A075B641 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
Trav8-1A0A075B641 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC10.5□□□□□ -0.73
Trav8-1A0A075B641 Gm3272-201ENSMUST00000181181 1229 ntBASIC10.5□□□□□ -0.73
Trav8-1A0A075B641 Gm29994-201ENSMUST00000195495 1193 ntBASIC10.5□□□□□ -0.73
Trav8-1A0A075B641 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav8-1A0A075B641 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav8-1A0A075B641 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC10.5□□□□□ -0.73
Trav8-1A0A075B641 Gm5417-201ENSMUST00000079706 384 ntBASIC10.5□□□□□ -0.73
Trav8-1A0A075B641 Gm10566-201ENSMUST00000086739 996 ntBASIC10.5□□□□□ -0.73
Trav8-1A0A075B641 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trav8-1A0A075B641 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms