Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav5-1A0A075B5Z7 AC154767.3-201ENSMUST00000225150 1342 ntBASIC12.57□□□□□ -0.4
Trav5-1A0A075B5Z7 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav5-1A0A075B5Z7 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav5-1A0A075B5Z7 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav5-1A0A075B5Z7 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav5-1A0A075B5Z7 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav5-1A0A075B5Z7 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Trav5-1A0A075B5Z7 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC12.57□□□□□ -0.4
Trav5-1A0A075B5Z7 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav5-1A0A075B5Z7 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav5-1A0A075B5Z7 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav5-1A0A075B5Z7 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav5-1A0A075B5Z7 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav5-1A0A075B5Z7 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav5-1A0A075B5Z7 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav5-1A0A075B5Z7 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC12.56□□□□□ -0.4
Trav5-1A0A075B5Z7 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC12.56□□□□□ -0.4
Trav5-1A0A075B5Z7 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC12.56□□□□□ -0.4
Trav5-1A0A075B5Z7 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav5-1A0A075B5Z7 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav5-1A0A075B5Z7 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC12.56□□□□□ -0.4
Trav5-1A0A075B5Z7 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav5-1A0A075B5Z7 Gm13015-201ENSMUST00000118674 204 ntBASIC12.56□□□□□ -0.4
Trav5-1A0A075B5Z7 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav5-1A0A075B5Z7 Gm25925-201ENSMUST00000158314 306 ntBASIC12.56□□□□□ -0.4
Trav5-1A0A075B5Z7 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav5-1A0A075B5Z7 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav5-1A0A075B5Z7 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav5-1A0A075B5Z7 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Trav5-1A0A075B5Z7 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC12.56□□□□□ -0.4
Trav5-1A0A075B5Z7 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trav5-1A0A075B5Z7 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav5-1A0A075B5Z7 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav5-1A0A075B5Z7 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav5-1A0A075B5Z7 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav5-1A0A075B5Z7 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC12.56□□□□□ -0.4
Trav5-1A0A075B5Z7 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav5-1A0A075B5Z7 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav5-1A0A075B5Z7 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Trav5-1A0A075B5Z7 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav5-1A0A075B5Z7 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Trav5-1A0A075B5Z7 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Trav5-1A0A075B5Z7 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC12.55□□□□□ -0.4
Trav5-1A0A075B5Z7 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav5-1A0A075B5Z7 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav5-1A0A075B5Z7 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav5-1A0A075B5Z7 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav5-1A0A075B5Z7 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Trav5-1A0A075B5Z7 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Trav5-1A0A075B5Z7 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav5-1A0A075B5Z7 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav5-1A0A075B5Z7 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav5-1A0A075B5Z7 CT010478.1-201ENSMUST00000220747 2787 ntBASIC12.55□□□□□ -0.4
Trav5-1A0A075B5Z7 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav5-1A0A075B5Z7 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav5-1A0A075B5Z7 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav5-1A0A075B5Z7 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav5-1A0A075B5Z7 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav5-1A0A075B5Z7 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav5-1A0A075B5Z7 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav5-1A0A075B5Z7 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC12.55□□□□□ -0.4
Trav5-1A0A075B5Z7 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC12.55□□□□□ -0.4
Trav5-1A0A075B5Z7 Gm10576-201ENSMUST00000191927 825 ntBASIC12.55□□□□□ -0.4
Trav5-1A0A075B5Z7 Gm37230-201ENSMUST00000194491 818 ntBASIC12.55□□□□□ -0.4
Trav5-1A0A075B5Z7 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav5-1A0A075B5Z7 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav5-1A0A075B5Z7 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Trav5-1A0A075B5Z7 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Trav5-1A0A075B5Z7 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav5-1A0A075B5Z7 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav5-1A0A075B5Z7 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav5-1A0A075B5Z7 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav5-1A0A075B5Z7 Gm5357-201ENSMUST00000212720 1924 ntBASIC12.54□□□□□ -0.4
Trav5-1A0A075B5Z7 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav5-1A0A075B5Z7 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav5-1A0A075B5Z7 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC12.54□□□□□ -0.4
Trav5-1A0A075B5Z7 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav5-1A0A075B5Z7 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav5-1A0A075B5Z7 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Trav5-1A0A075B5Z7 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trav5-1A0A075B5Z7 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav5-1A0A075B5Z7 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav5-1A0A075B5Z7 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC12.54□□□□□ -0.4
Trav5-1A0A075B5Z7 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Trav5-1A0A075B5Z7 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trav5-1A0A075B5Z7 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav5-1A0A075B5Z7 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav5-1A0A075B5Z7 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Trav5-1A0A075B5Z7 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav5-1A0A075B5Z7 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC12.54□□□□□ -0.4
Trav5-1A0A075B5Z7 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Trav5-1A0A075B5Z7 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav5-1A0A075B5Z7 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC12.54□□□□□ -0.4
Trav5-1A0A075B5Z7 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav5-1A0A075B5Z7 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Trav5-1A0A075B5Z7 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav5-1A0A075B5Z7 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Trav5-1A0A075B5Z7 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav5-1A0A075B5Z7 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms