Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
PdfS4R2K0 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC11.28□□□□□ -0.6
PdfS4R2K0 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
PdfS4R2K0 AC108846.1-201ENSMUST00000214531 513 ntBASIC11.28□□□□□ -0.6
PdfS4R2K0 AC127302.2-201ENSMUST00000215212 268 ntBASIC11.28□□□□□ -0.6
PdfS4R2K0 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
PdfS4R2K0 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
PdfS4R2K0 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
PdfS4R2K0 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
PdfS4R2K0 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
PdfS4R2K0 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
PdfS4R2K0 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
PdfS4R2K0 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
PdfS4R2K0 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
PdfS4R2K0 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
PdfS4R2K0 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
PdfS4R2K0 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
PdfS4R2K0 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
PdfS4R2K0 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
PdfS4R2K0 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
PdfS4R2K0 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
PdfS4R2K0 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
PdfS4R2K0 Gm43570-201ENSMUST00000199951 3688 ntBASIC11.28□□□□□ -0.6
PdfS4R2K0 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
PdfS4R2K0 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC11.27□□□□□ -0.6
PdfS4R2K0 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
PdfS4R2K0 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
PdfS4R2K0 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC11.27□□□□□ -0.6
PdfS4R2K0 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
PdfS4R2K0 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
PdfS4R2K0 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
PdfS4R2K0 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
PdfS4R2K0 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
PdfS4R2K0 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
PdfS4R2K0 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
PdfS4R2K0 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
PdfS4R2K0 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
PdfS4R2K0 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
PdfS4R2K0 Prkcz2-201ENSMUST00000206136 1756 ntBASIC11.27□□□□□ -0.61
PdfS4R2K0 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
PdfS4R2K0 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
PdfS4R2K0 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC11.27□□□□□ -0.61
PdfS4R2K0 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
PdfS4R2K0 Umpk-ps-201ENSMUST00000211897 827 ntBASIC11.27□□□□□ -0.61
PdfS4R2K0 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC11.27□□□□□ -0.61
PdfS4R2K0 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
PdfS4R2K0 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
PdfS4R2K0 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
PdfS4R2K0 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.61
PdfS4R2K0 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
PdfS4R2K0 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
PdfS4R2K0 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
PdfS4R2K0 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
PdfS4R2K0 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
PdfS4R2K0 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
PdfS4R2K0 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC11.27□□□□□ -0.61
PdfS4R2K0 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
PdfS4R2K0 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
PdfS4R2K0 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
PdfS4R2K0 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
PdfS4R2K0 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
PdfS4R2K0 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
PdfS4R2K0 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
PdfS4R2K0 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
PdfS4R2K0 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
PdfS4R2K0 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
PdfS4R2K0 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
PdfS4R2K0 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
PdfS4R2K0 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
PdfS4R2K0 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
PdfS4R2K0 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
PdfS4R2K0 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
PdfS4R2K0 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
PdfS4R2K0 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
PdfS4R2K0 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
PdfS4R2K0 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
PdfS4R2K0 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
PdfS4R2K0 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC11.26□□□□□ -0.61
PdfS4R2K0 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
PdfS4R2K0 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
PdfS4R2K0 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
PdfS4R2K0 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
PdfS4R2K0 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
PdfS4R2K0 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
PdfS4R2K0 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC11.26□□□□□ -0.61
PdfS4R2K0 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
PdfS4R2K0 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
PdfS4R2K0 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC11.26□□□□□ -0.61
PdfS4R2K0 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
PdfS4R2K0 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC11.26□□□□□ -0.61
PdfS4R2K0 AC124569.2-201ENSMUST00000225998 818 ntBASIC11.26□□□□□ -0.61
PdfS4R2K0 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
PdfS4R2K0 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
PdfS4R2K0 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
PdfS4R2K0 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
PdfS4R2K0 Spr-ps1-201ENSMUST00000089584 605 ntBASIC11.26□□□□□ -0.61
PdfS4R2K0 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC11.26□□□□□ -0.61
PdfS4R2K0 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
PdfS4R2K0 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
PdfS4R2K0 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 85.9 ms