Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smarcb1Q9Z0H3 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Smarcb1Q9Z0H3 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smarcb1Q9Z0H3 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smarcb1Q9Z0H3 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Smarcb1Q9Z0H3 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smarcb1Q9Z0H3 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smarcb1Q9Z0H3 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Smarcb1Q9Z0H3 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smarcb1Q9Z0H3 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smarcb1Q9Z0H3 Gm12151-201ENSMUST00000121374 290 ntBASIC15.18■□□□□ 0.02
Smarcb1Q9Z0H3 Shd-206ENSMUST00000225145 998 ntBASIC15.18■□□□□ 0.02
Smarcb1Q9Z0H3 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smarcb1Q9Z0H3 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smarcb1Q9Z0H3 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smarcb1Q9Z0H3 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smarcb1Q9Z0H3 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Smarcb1Q9Z0H3 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smarcb1Q9Z0H3 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Smarcb1Q9Z0H3 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smarcb1Q9Z0H3 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smarcb1Q9Z0H3 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Smarcb1Q9Z0H3 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Smarcb1Q9Z0H3 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Smarcb1Q9Z0H3 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smarcb1Q9Z0H3 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smarcb1Q9Z0H3 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Smarcb1Q9Z0H3 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
Smarcb1Q9Z0H3 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smarcb1Q9Z0H3 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC15.17■□□□□ 0.02
Smarcb1Q9Z0H3 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smarcb1Q9Z0H3 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Smarcb1Q9Z0H3 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Smarcb1Q9Z0H3 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smarcb1Q9Z0H3 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smarcb1Q9Z0H3 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Smarcb1Q9Z0H3 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Smarcb1Q9Z0H3 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC15.17■□□□□ 0.02
Smarcb1Q9Z0H3 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Smarcb1Q9Z0H3 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC15.17■□□□□ 0.02
Smarcb1Q9Z0H3 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Smarcb1Q9Z0H3 Gm10275-202ENSMUST00000168697 495 ntBASIC15.17■□□□□ 0.02
Smarcb1Q9Z0H3 Gm27437-201ENSMUST00000183429 107 ntBASIC15.17■□□□□ 0.02
Smarcb1Q9Z0H3 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC15.17■□□□□ 0.02
Smarcb1Q9Z0H3 Gm7775-201ENSMUST00000218871 853 ntBASIC15.17■□□□□ 0.02
Smarcb1Q9Z0H3 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smarcb1Q9Z0H3 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smarcb1Q9Z0H3 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smarcb1Q9Z0H3 Gm10275-201ENSMUST00000092620 635 ntBASIC15.17■□□□□ 0.02
Smarcb1Q9Z0H3 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smarcb1Q9Z0H3 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smarcb1Q9Z0H3 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smarcb1Q9Z0H3 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC15.17■□□□□ 0.02
Smarcb1Q9Z0H3 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smarcb1Q9Z0H3 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Smarcb1Q9Z0H3 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smarcb1Q9Z0H3 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smarcb1Q9Z0H3 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smarcb1Q9Z0H3 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smarcb1Q9Z0H3 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Smarcb1Q9Z0H3 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC15.16■□□□□ 0.02
Smarcb1Q9Z0H3 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smarcb1Q9Z0H3 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smarcb1Q9Z0H3 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smarcb1Q9Z0H3 Gm12428-201ENSMUST00000119844 727 ntBASIC15.16■□□□□ 0.02
Smarcb1Q9Z0H3 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC15.16■□□□□ 0.02
Smarcb1Q9Z0H3 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Smarcb1Q9Z0H3 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC15.16■□□□□ 0.02
Smarcb1Q9Z0H3 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Smarcb1Q9Z0H3 Dupd1-202ENSMUST00000224735 548 ntBASIC15.16■□□□□ 0.02
Smarcb1Q9Z0H3 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smarcb1Q9Z0H3 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smarcb1Q9Z0H3 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smarcb1Q9Z0H3 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smarcb1Q9Z0H3 Gm14780-201ENSMUST00000118387 2737 ntBASIC15.16■□□□□ 0.02
Smarcb1Q9Z0H3 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smarcb1Q9Z0H3 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Smarcb1Q9Z0H3 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC15.16■□□□□ 0.02
Smarcb1Q9Z0H3 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smarcb1Q9Z0H3 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Smarcb1Q9Z0H3 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC15.16■□□□□ 0.02
Smarcb1Q9Z0H3 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smarcb1Q9Z0H3 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Smarcb1Q9Z0H3 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smarcb1Q9Z0H3 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smarcb1Q9Z0H3 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smarcb1Q9Z0H3 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smarcb1Q9Z0H3 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smarcb1Q9Z0H3 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Smarcb1Q9Z0H3 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Smarcb1Q9Z0H3 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smarcb1Q9Z0H3 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smarcb1Q9Z0H3 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smarcb1Q9Z0H3 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC15.15■□□□□ 0.02
Smarcb1Q9Z0H3 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smarcb1Q9Z0H3 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smarcb1Q9Z0H3 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smarcb1Q9Z0H3 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC15.15■□□□□ 0.02
Smarcb1Q9Z0H3 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Smarcb1Q9Z0H3 Gm27838-201ENSMUST00000184829 128 ntBASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms