Protein–RNA interactions for Protein: Q9R1Q9

Atp6ap1, V-type proton ATPase subunit S1, mousemouse

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6ap1Q9R1Q9 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC14.35□□□□□ -0.11
Atp6ap1Q9R1Q9 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Atp6ap1Q9R1Q9 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Atp6ap1Q9R1Q9 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Atp6ap1Q9R1Q9 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Atp6ap1Q9R1Q9 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Atp6ap1Q9R1Q9 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Atp6ap1Q9R1Q9 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Atp6ap1Q9R1Q9 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Atp6ap1Q9R1Q9 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Atp6ap1Q9R1Q9 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Atp6ap1Q9R1Q9 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Atp6ap1Q9R1Q9 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC14.34□□□□□ -0.11
Atp6ap1Q9R1Q9 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Atp6ap1Q9R1Q9 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Atp6ap1Q9R1Q9 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Atp6ap1Q9R1Q9 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Atp6ap1Q9R1Q9 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Atp6ap1Q9R1Q9 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Atp6ap1Q9R1Q9 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Atp6ap1Q9R1Q9 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Atp6ap1Q9R1Q9 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC14.34□□□□□ -0.11
Atp6ap1Q9R1Q9 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Atp6ap1Q9R1Q9 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Atp6ap1Q9R1Q9 Ndufaf2-202ENSMUST00000223734 556 ntBASIC14.34□□□□□ -0.11
Atp6ap1Q9R1Q9 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Atp6ap1Q9R1Q9 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Atp6ap1Q9R1Q9 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Atp6ap1Q9R1Q9 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC14.34□□□□□ -0.11
Atp6ap1Q9R1Q9 Carlr-201ENSMUST00000181515 2574 ntBASIC14.34□□□□□ -0.11
Atp6ap1Q9R1Q9 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Atp6ap1Q9R1Q9 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Atp6ap1Q9R1Q9 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Atp6ap1Q9R1Q9 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Atp6ap1Q9R1Q9 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Atp6ap1Q9R1Q9 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
Atp6ap1Q9R1Q9 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Atp6ap1Q9R1Q9 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Atp6ap1Q9R1Q9 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Atp6ap1Q9R1Q9 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Atp6ap1Q9R1Q9 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
Atp6ap1Q9R1Q9 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Atp6ap1Q9R1Q9 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Atp6ap1Q9R1Q9 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC14.33□□□□□ -0.11
Atp6ap1Q9R1Q9 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Atp6ap1Q9R1Q9 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Atp6ap1Q9R1Q9 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC14.33□□□□□ -0.12
Atp6ap1Q9R1Q9 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Atp6ap1Q9R1Q9 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Atp6ap1Q9R1Q9 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Atp6ap1Q9R1Q9 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Atp6ap1Q9R1Q9 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.33□□□□□ -0.12
Atp6ap1Q9R1Q9 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
Atp6ap1Q9R1Q9 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Atp6ap1Q9R1Q9 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.33□□□□□ -0.12
Atp6ap1Q9R1Q9 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Atp6ap1Q9R1Q9 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Atp6ap1Q9R1Q9 Gm25911-201ENSMUST00000157621 56 ntBASIC14.33□□□□□ -0.12
Atp6ap1Q9R1Q9 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Atp6ap1Q9R1Q9 Gm2213-201ENSMUST00000197485 688 ntBASIC14.33□□□□□ -0.12
Atp6ap1Q9R1Q9 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Atp6ap1Q9R1Q9 Gpr146-202ENSMUST00000053120 1040 ntBASIC14.33□□□□□ -0.12
Atp6ap1Q9R1Q9 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Atp6ap1Q9R1Q9 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Atp6ap1Q9R1Q9 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Atp6ap1Q9R1Q9 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Atp6ap1Q9R1Q9 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Atp6ap1Q9R1Q9 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC14.33□□□□□ -0.12
Atp6ap1Q9R1Q9 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Atp6ap1Q9R1Q9 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Atp6ap1Q9R1Q9 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Atp6ap1Q9R1Q9 Gm10605-202ENSMUST00000183019 3198 ntBASIC14.33□□□□□ -0.12
Atp6ap1Q9R1Q9 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
Atp6ap1Q9R1Q9 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Atp6ap1Q9R1Q9 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Atp6ap1Q9R1Q9 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Atp6ap1Q9R1Q9 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Atp6ap1Q9R1Q9 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Atp6ap1Q9R1Q9 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Atp6ap1Q9R1Q9 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Atp6ap1Q9R1Q9 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Atp6ap1Q9R1Q9 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Atp6ap1Q9R1Q9 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Atp6ap1Q9R1Q9 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Atp6ap1Q9R1Q9 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
Atp6ap1Q9R1Q9 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Atp6ap1Q9R1Q9 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Atp6ap1Q9R1Q9 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Atp6ap1Q9R1Q9 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Atp6ap1Q9R1Q9 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Atp6ap1Q9R1Q9 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Atp6ap1Q9R1Q9 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Atp6ap1Q9R1Q9 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC14.32□□□□□ -0.12
Atp6ap1Q9R1Q9 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC14.32□□□□□ -0.12
Atp6ap1Q9R1Q9 Gm15483-201ENSMUST00000120338 456 ntBASIC14.32□□□□□ -0.12
Atp6ap1Q9R1Q9 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC14.32□□□□□ -0.12
Atp6ap1Q9R1Q9 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC14.32□□□□□ -0.12
Atp6ap1Q9R1Q9 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Atp6ap1Q9R1Q9 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Atp6ap1Q9R1Q9 Gm4691-201ENSMUST00000182339 1000 ntBASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 150.6 ms