Protein–RNA interactions for Protein: Q9QZ88

Vps29, Vacuolar protein sorting-associated protein 29, mousemouse

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps29Q9QZ88 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vps29Q9QZ88 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vps29Q9QZ88 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC14.05□□□□□ -0.16
Vps29Q9QZ88 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vps29Q9QZ88 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Vps29Q9QZ88 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps29Q9QZ88 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Vps29Q9QZ88 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Vps29Q9QZ88 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps29Q9QZ88 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps29Q9QZ88 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps29Q9QZ88 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps29Q9QZ88 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps29Q9QZ88 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.04□□□□□ -0.16
Vps29Q9QZ88 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps29Q9QZ88 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps29Q9QZ88 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps29Q9QZ88 Gm16198-201ENSMUST00000118766 670 ntBASIC14.04□□□□□ -0.16
Vps29Q9QZ88 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC14.04□□□□□ -0.16
Vps29Q9QZ88 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps29Q9QZ88 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps29Q9QZ88 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps29Q9QZ88 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Vps29Q9QZ88 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps29Q9QZ88 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps29Q9QZ88 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps29Q9QZ88 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps29Q9QZ88 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps29Q9QZ88 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps29Q9QZ88 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps29Q9QZ88 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps29Q9QZ88 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Vps29Q9QZ88 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Vps29Q9QZ88 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps29Q9QZ88 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.03□□□□□ -0.16
Vps29Q9QZ88 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Vps29Q9QZ88 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps29Q9QZ88 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps29Q9QZ88 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Vps29Q9QZ88 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.03□□□□□ -0.16
Vps29Q9QZ88 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC14.03□□□□□ -0.16
Vps29Q9QZ88 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Vps29Q9QZ88 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps29Q9QZ88 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps29Q9QZ88 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Vps29Q9QZ88 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Vps29Q9QZ88 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Vps29Q9QZ88 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps29Q9QZ88 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps29Q9QZ88 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC14.03□□□□□ -0.16
Vps29Q9QZ88 Gm5177-201ENSMUST00000183092 997 ntBASIC14.03□□□□□ -0.16
Vps29Q9QZ88 Thap2-203ENSMUST00000218989 527 ntBASIC14.03□□□□□ -0.16
Vps29Q9QZ88 Psmb5-202ENSMUST00000227257 622 ntBASIC14.03□□□□□ -0.16
Vps29Q9QZ88 Gm7461-201ENSMUST00000058918 827 ntBASIC14.03□□□□□ -0.16
Vps29Q9QZ88 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps29Q9QZ88 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps29Q9QZ88 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps29Q9QZ88 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps29Q9QZ88 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC14.03□□□□□ -0.16
Vps29Q9QZ88 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Vps29Q9QZ88 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps29Q9QZ88 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps29Q9QZ88 Gm44981-201ENSMUST00000205549 1943 ntBASIC14.03□□□□□ -0.16
Vps29Q9QZ88 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps29Q9QZ88 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps29Q9QZ88 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Vps29Q9QZ88 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps29Q9QZ88 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps29Q9QZ88 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps29Q9QZ88 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps29Q9QZ88 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps29Q9QZ88 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Vps29Q9QZ88 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vps29Q9QZ88 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Vps29Q9QZ88 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Vps29Q9QZ88 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Vps29Q9QZ88 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vps29Q9QZ88 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vps29Q9QZ88 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vps29Q9QZ88 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vps29Q9QZ88 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vps29Q9QZ88 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vps29Q9QZ88 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC14.02□□□□□ -0.17
Vps29Q9QZ88 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Vps29Q9QZ88 Gm6944-201ENSMUST00000182449 1006 ntBASIC14.02□□□□□ -0.17
Vps29Q9QZ88 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC14.02□□□□□ -0.17
Vps29Q9QZ88 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Vps29Q9QZ88 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Vps29Q9QZ88 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vps29Q9QZ88 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vps29Q9QZ88 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vps29Q9QZ88 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vps29Q9QZ88 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.02□□□□□ -0.17
Vps29Q9QZ88 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Vps29Q9QZ88 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vps29Q9QZ88 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vps29Q9QZ88 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Vps29Q9QZ88 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Vps29Q9QZ88 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Vps29Q9QZ88 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms