Protein–RNA interactions for Protein: Q9QZ28

Six6, Homeobox protein SIX6, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six6Q9QZ28 Gm38346-201ENSMUST00000192379 2639 ntBASIC12.43□□□□□ -0.42
Six6Q9QZ28 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Six6Q9QZ28 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Six6Q9QZ28 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Six6Q9QZ28 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
Six6Q9QZ28 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Six6Q9QZ28 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Six6Q9QZ28 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Six6Q9QZ28 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Six6Q9QZ28 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC12.43□□□□□ -0.42
Six6Q9QZ28 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Six6Q9QZ28 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Six6Q9QZ28 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Six6Q9QZ28 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Six6Q9QZ28 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Six6Q9QZ28 Gm7286-201ENSMUST00000182691 1007 ntBASIC12.43□□□□□ -0.42
Six6Q9QZ28 Mir1668-201ENSMUST00000184114 107 ntBASIC12.43□□□□□ -0.42
Six6Q9QZ28 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Six6Q9QZ28 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC12.43□□□□□ -0.42
Six6Q9QZ28 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Six6Q9QZ28 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Six6Q9QZ28 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Six6Q9QZ28 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Six6Q9QZ28 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Six6Q9QZ28 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Six6Q9QZ28 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Six6Q9QZ28 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Six6Q9QZ28 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Six6Q9QZ28 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Six6Q9QZ28 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Six6Q9QZ28 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Six6Q9QZ28 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Six6Q9QZ28 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Six6Q9QZ28 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Six6Q9QZ28 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC12.42□□□□□ -0.42
Six6Q9QZ28 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Six6Q9QZ28 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Six6Q9QZ28 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Six6Q9QZ28 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC12.42□□□□□ -0.42
Six6Q9QZ28 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Six6Q9QZ28 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Six6Q9QZ28 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Six6Q9QZ28 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
Six6Q9QZ28 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Six6Q9QZ28 Gm4609-201ENSMUST00000106443 1002 ntBASIC12.42□□□□□ -0.42
Six6Q9QZ28 Gm5138-201ENSMUST00000113842 1002 ntBASIC12.42□□□□□ -0.42
Six6Q9QZ28 Gm15191-201ENSMUST00000117933 1000 ntBASIC12.42□□□□□ -0.42
Six6Q9QZ28 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC12.42□□□□□ -0.42
Six6Q9QZ28 Gm12182-201ENSMUST00000118655 1008 ntBASIC12.42□□□□□ -0.42
Six6Q9QZ28 Gm13882-201ENSMUST00000120886 1002 ntBASIC12.42□□□□□ -0.42
Six6Q9QZ28 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC12.42□□□□□ -0.42
Six6Q9QZ28 Gm10284-201ENSMUST00000145057 1005 ntBASIC12.42□□□□□ -0.42
Six6Q9QZ28 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Six6Q9QZ28 Gm10481-201ENSMUST00000179228 1002 ntBASIC12.42□□□□□ -0.42
Six6Q9QZ28 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC12.42□□□□□ -0.42
Six6Q9QZ28 Gm2574-201ENSMUST00000181051 1002 ntBASIC12.42□□□□□ -0.42
Six6Q9QZ28 Gm3200-201ENSMUST00000181493 1002 ntBASIC12.42□□□□□ -0.42
Six6Q9QZ28 Gm8825-201ENSMUST00000182565 998 ntBASIC12.42□□□□□ -0.42
Six6Q9QZ28 Gm4518-201ENSMUST00000182638 718 ntBASIC12.42□□□□□ -0.42
Six6Q9QZ28 Gm8330-201ENSMUST00000182754 1008 ntBASIC12.42□□□□□ -0.42
Six6Q9QZ28 Gm4575-201ENSMUST00000182991 1002 ntBASIC12.42□□□□□ -0.42
Six6Q9QZ28 Gm8709-201ENSMUST00000183230 1012 ntBASIC12.42□□□□□ -0.42
Six6Q9QZ28 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC12.42□□□□□ -0.42
Six6Q9QZ28 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Six6Q9QZ28 AC154649.1-201ENSMUST00000227392 384 ntBASIC12.42□□□□□ -0.42
Six6Q9QZ28 Gm9987-201ENSMUST00000069768 567 ntBASIC12.42□□□□□ -0.42
Six6Q9QZ28 Gm10293-201ENSMUST00000076317 1002 ntBASIC12.42□□□□□ -0.42
Six6Q9QZ28 Gm6316-201ENSMUST00000082064 1020 ntBASIC12.42□□□□□ -0.42
Six6Q9QZ28 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Six6Q9QZ28 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Six6Q9QZ28 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Six6Q9QZ28 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC12.42□□□□□ -0.42
Six6Q9QZ28 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Six6Q9QZ28 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Six6Q9QZ28 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Six6Q9QZ28 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.42□□□□□ -0.42
Six6Q9QZ28 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Six6Q9QZ28 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Six6Q9QZ28 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Six6Q9QZ28 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Six6Q9QZ28 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Six6Q9QZ28 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Six6Q9QZ28 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Six6Q9QZ28 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Six6Q9QZ28 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Six6Q9QZ28 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC12.41□□□□□ -0.42
Six6Q9QZ28 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Six6Q9QZ28 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Six6Q9QZ28 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Six6Q9QZ28 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Six6Q9QZ28 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Six6Q9QZ28 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC12.41□□□□□ -0.42
Six6Q9QZ28 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Six6Q9QZ28 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC12.41□□□□□ -0.42
Six6Q9QZ28 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Six6Q9QZ28 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Six6Q9QZ28 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
Six6Q9QZ28 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC12.41□□□□□ -0.42
Six6Q9QZ28 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Six6Q9QZ28 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms