Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Gm37728-201ENSMUST00000195025 2292 ntBASIC13.23□□□□□ -0.29
Sec61a2Q9JLR1 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Sec61a2Q9JLR1 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sec61a2Q9JLR1 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sec61a2Q9JLR1 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Sec61a2Q9JLR1 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sec61a2Q9JLR1 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sec61a2Q9JLR1 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Sec61a2Q9JLR1 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sec61a2Q9JLR1 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sec61a2Q9JLR1 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sec61a2Q9JLR1 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sec61a2Q9JLR1 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sec61a2Q9JLR1 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Sec61a2Q9JLR1 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sec61a2Q9JLR1 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sec61a2Q9JLR1 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sec61a2Q9JLR1 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Sec61a2Q9JLR1 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Sec61a2Q9JLR1 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sec61a2Q9JLR1 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC13.22□□□□□ -0.29
Sec61a2Q9JLR1 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sec61a2Q9JLR1 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sec61a2Q9JLR1 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sec61a2Q9JLR1 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sec61a2Q9JLR1 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sec61a2Q9JLR1 Camk2g-217ENSMUST00000226630 1937 ntBASIC13.22□□□□□ -0.29
Sec61a2Q9JLR1 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sec61a2Q9JLR1 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Sec61a2Q9JLR1 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC13.22□□□□□ -0.29
Sec61a2Q9JLR1 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sec61a2Q9JLR1 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC13.22□□□□□ -0.29
Sec61a2Q9JLR1 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Sec61a2Q9JLR1 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC13.22□□□□□ -0.29
Sec61a2Q9JLR1 Gm43332-201ENSMUST00000202511 1044 ntBASIC13.22□□□□□ -0.29
Sec61a2Q9JLR1 CT010506.4-201ENSMUST00000225457 351 ntBASIC13.22□□□□□ -0.29
Sec61a2Q9JLR1 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sec61a2Q9JLR1 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sec61a2Q9JLR1 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sec61a2Q9JLR1 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC13.22□□□□□ -0.29
Sec61a2Q9JLR1 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Sec61a2Q9JLR1 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Sec61a2Q9JLR1 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Sec61a2Q9JLR1 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sec61a2Q9JLR1 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sec61a2Q9JLR1 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC13.22□□□□□ -0.29
Sec61a2Q9JLR1 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sec61a2Q9JLR1 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sec61a2Q9JLR1 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sec61a2Q9JLR1 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sec61a2Q9JLR1 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Sec61a2Q9JLR1 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Sec61a2Q9JLR1 Gm11873-201ENSMUST00000117877 1304 ntBASIC13.21□□□□□ -0.29
Sec61a2Q9JLR1 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sec61a2Q9JLR1 Gm11960-202ENSMUST00000181063 2858 ntBASIC13.21□□□□□ -0.29
Sec61a2Q9JLR1 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Sec61a2Q9JLR1 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sec61a2Q9JLR1 Gm13597-201ENSMUST00000121239 375 ntBASIC13.21□□□□□ -0.29
Sec61a2Q9JLR1 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC13.21□□□□□ -0.29
Sec61a2Q9JLR1 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Sec61a2Q9JLR1 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC13.21□□□□□ -0.29
Sec61a2Q9JLR1 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sec61a2Q9JLR1 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sec61a2Q9JLR1 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC13.21□□□□□ -0.29
Sec61a2Q9JLR1 Mxra8os-201ENSMUST00000097740 687 ntBASIC13.21□□□□□ -0.29
Sec61a2Q9JLR1 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Sec61a2Q9JLR1 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sec61a2Q9JLR1 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sec61a2Q9JLR1 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.21□□□□□ -0.29
Sec61a2Q9JLR1 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sec61a2Q9JLR1 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Sec61a2Q9JLR1 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Sec61a2Q9JLR1 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sec61a2Q9JLR1 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sec61a2Q9JLR1 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Sec61a2Q9JLR1 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Sec61a2Q9JLR1 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Sec61a2Q9JLR1 AC130669.1-201ENSMUST00000228537 1672 ntBASIC13.21□□□□□ -0.3
Sec61a2Q9JLR1 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Sec61a2Q9JLR1 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sec61a2Q9JLR1 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sec61a2Q9JLR1 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Sec61a2Q9JLR1 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sec61a2Q9JLR1 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Sec61a2Q9JLR1 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sec61a2Q9JLR1 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Sec61a2Q9JLR1 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sec61a2Q9JLR1 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sec61a2Q9JLR1 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC13.2□□□□□ -0.3
Sec61a2Q9JLR1 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sec61a2Q9JLR1 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
Sec61a2Q9JLR1 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sec61a2Q9JLR1 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC13.2□□□□□ -0.3
Sec61a2Q9JLR1 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sec61a2Q9JLR1 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sec61a2Q9JLR1 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Sec61a2Q9JLR1 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC13.2□□□□□ -0.3
Sec61a2Q9JLR1 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC13.2□□□□□ -0.3
Sec61a2Q9JLR1 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sec61a2Q9JLR1 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms