Protein–RNA interactions for Protein: Q9JIG8

Praf2, PRA1 family protein 2, mousemouse

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Praf2Q9JIG8 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Praf2Q9JIG8 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Praf2Q9JIG8 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC13.01□□□□□ -0.33
Praf2Q9JIG8 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Praf2Q9JIG8 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Praf2Q9JIG8 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC13.01□□□□□ -0.33
Praf2Q9JIG8 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Praf2Q9JIG8 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Praf2Q9JIG8 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC13.01□□□□□ -0.33
Praf2Q9JIG8 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC13.01□□□□□ -0.33
Praf2Q9JIG8 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC13.01□□□□□ -0.33
Praf2Q9JIG8 AC127349.1-201ENSMUST00000224590 266 ntBASIC13.01□□□□□ -0.33
Praf2Q9JIG8 Arhgef33-211ENSMUST00000225658 473 ntBASIC13.01□□□□□ -0.33
Praf2Q9JIG8 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Praf2Q9JIG8 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Praf2Q9JIG8 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Praf2Q9JIG8 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Praf2Q9JIG8 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Praf2Q9JIG8 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Praf2Q9JIG8 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Praf2Q9JIG8 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Praf2Q9JIG8 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Praf2Q9JIG8 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Praf2Q9JIG8 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC13.01□□□□□ -0.33
Praf2Q9JIG8 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Praf2Q9JIG8 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC13.01□□□□□ -0.33
Praf2Q9JIG8 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Praf2Q9JIG8 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Praf2Q9JIG8 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Praf2Q9JIG8 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC13.01□□□□□ -0.33
Praf2Q9JIG8 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Praf2Q9JIG8 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Praf2Q9JIG8 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Praf2Q9JIG8 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Praf2Q9JIG8 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Praf2Q9JIG8 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Praf2Q9JIG8 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Praf2Q9JIG8 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Praf2Q9JIG8 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Praf2Q9JIG8 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Praf2Q9JIG8 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Praf2Q9JIG8 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Praf2Q9JIG8 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC13□□□□□ -0.33
Praf2Q9JIG8 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC13□□□□□ -0.33
Praf2Q9JIG8 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
Praf2Q9JIG8 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC13□□□□□ -0.33
Praf2Q9JIG8 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC13□□□□□ -0.33
Praf2Q9JIG8 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Praf2Q9JIG8 Mir770-201ENSMUST00000103252 94 ntBASIC13□□□□□ -0.33
Praf2Q9JIG8 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC13□□□□□ -0.33
Praf2Q9JIG8 Gm13312-201ENSMUST00000119631 718 ntBASIC13□□□□□ -0.33
Praf2Q9JIG8 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Praf2Q9JIG8 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC13□□□□□ -0.33
Praf2Q9JIG8 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC13□□□□□ -0.33
Praf2Q9JIG8 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC13□□□□□ -0.33
Praf2Q9JIG8 Gm18959-201ENSMUST00000208954 655 ntBASIC13□□□□□ -0.33
Praf2Q9JIG8 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Praf2Q9JIG8 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Praf2Q9JIG8 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Praf2Q9JIG8 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC13□□□□□ -0.33
Praf2Q9JIG8 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC13□□□□□ -0.33
Praf2Q9JIG8 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Praf2Q9JIG8 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Praf2Q9JIG8 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Praf2Q9JIG8 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Praf2Q9JIG8 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Praf2Q9JIG8 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC13□□□□□ -0.33
Praf2Q9JIG8 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Praf2Q9JIG8 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Praf2Q9JIG8 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Praf2Q9JIG8 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Praf2Q9JIG8 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Praf2Q9JIG8 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Praf2Q9JIG8 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Praf2Q9JIG8 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Praf2Q9JIG8 Gm43364-201ENSMUST00000196046 3274 ntBASIC12.99□□□□□ -0.33
Praf2Q9JIG8 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Praf2Q9JIG8 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Praf2Q9JIG8 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Praf2Q9JIG8 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC12.99□□□□□ -0.33
Praf2Q9JIG8 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Praf2Q9JIG8 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Praf2Q9JIG8 Vti1a-206ENSMUST00000225529 1244 ntBASIC12.99□□□□□ -0.33
Praf2Q9JIG8 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Praf2Q9JIG8 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Praf2Q9JIG8 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Praf2Q9JIG8 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Praf2Q9JIG8 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Praf2Q9JIG8 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Praf2Q9JIG8 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Praf2Q9JIG8 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC12.99□□□□□ -0.33
Praf2Q9JIG8 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Praf2Q9JIG8 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Praf2Q9JIG8 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Praf2Q9JIG8 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Praf2Q9JIG8 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Praf2Q9JIG8 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Praf2Q9JIG8 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Praf2Q9JIG8 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Praf2Q9JIG8 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms