Protein–RNA interactions for Protein: Q9ESF1

Otof, Otoferlin, mousemouse

Predictions only

Length 1,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OtofQ9ESF1 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
OtofQ9ESF1 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
OtofQ9ESF1 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
OtofQ9ESF1 Camk2g-217ENSMUST00000226630 1937 ntBASIC14.46□□□□□ -0.09
OtofQ9ESF1 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
OtofQ9ESF1 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
OtofQ9ESF1 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
OtofQ9ESF1 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
OtofQ9ESF1 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
OtofQ9ESF1 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
OtofQ9ESF1 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
OtofQ9ESF1 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
OtofQ9ESF1 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
OtofQ9ESF1 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
OtofQ9ESF1 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
OtofQ9ESF1 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
OtofQ9ESF1 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
OtofQ9ESF1 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
OtofQ9ESF1 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
OtofQ9ESF1 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC14.46□□□□□ -0.1
OtofQ9ESF1 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
OtofQ9ESF1 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
OtofQ9ESF1 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
OtofQ9ESF1 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
OtofQ9ESF1 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC14.45□□□□□ -0.1
OtofQ9ESF1 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
OtofQ9ESF1 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC14.45□□□□□ -0.1
OtofQ9ESF1 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC14.45□□□□□ -0.1
OtofQ9ESF1 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC14.45□□□□□ -0.1
OtofQ9ESF1 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC14.45□□□□□ -0.1
OtofQ9ESF1 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
OtofQ9ESF1 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
OtofQ9ESF1 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
OtofQ9ESF1 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
OtofQ9ESF1 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC14.45□□□□□ -0.1
OtofQ9ESF1 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
OtofQ9ESF1 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
OtofQ9ESF1 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
OtofQ9ESF1 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
OtofQ9ESF1 AC154412.1-201ENSMUST00000226540 2786 ntBASIC14.45□□□□□ -0.1
OtofQ9ESF1 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
OtofQ9ESF1 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
OtofQ9ESF1 AC130829.1-201ENSMUST00000221548 494 ntBASIC14.45□□□□□ -0.1
OtofQ9ESF1 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
OtofQ9ESF1 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
OtofQ9ESF1 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
OtofQ9ESF1 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
OtofQ9ESF1 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
OtofQ9ESF1 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
OtofQ9ESF1 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC14.45□□□□□ -0.1
OtofQ9ESF1 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
OtofQ9ESF1 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
OtofQ9ESF1 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
OtofQ9ESF1 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
OtofQ9ESF1 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC14.44□□□□□ -0.1
OtofQ9ESF1 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
OtofQ9ESF1 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
OtofQ9ESF1 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
OtofQ9ESF1 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
OtofQ9ESF1 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC14.44□□□□□ -0.1
OtofQ9ESF1 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
OtofQ9ESF1 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC14.44□□□□□ -0.1
OtofQ9ESF1 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC14.44□□□□□ -0.1
OtofQ9ESF1 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC14.44□□□□□ -0.1
OtofQ9ESF1 Gm6916-202ENSMUST00000205523 195 ntBASIC14.44□□□□□ -0.1
OtofQ9ESF1 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC14.44□□□□□ -0.1
OtofQ9ESF1 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC14.44□□□□□ -0.1
OtofQ9ESF1 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
OtofQ9ESF1 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
OtofQ9ESF1 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
OtofQ9ESF1 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
OtofQ9ESF1 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
OtofQ9ESF1 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
OtofQ9ESF1 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
OtofQ9ESF1 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
OtofQ9ESF1 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
OtofQ9ESF1 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
OtofQ9ESF1 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
OtofQ9ESF1 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
OtofQ9ESF1 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
OtofQ9ESF1 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
OtofQ9ESF1 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
OtofQ9ESF1 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
OtofQ9ESF1 Gm20445-201ENSMUST00000061905 565 ntBASIC14.43□□□□□ -0.1
OtofQ9ESF1 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
OtofQ9ESF1 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
OtofQ9ESF1 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
OtofQ9ESF1 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
OtofQ9ESF1 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
OtofQ9ESF1 Gm43598-201ENSMUST00000202482 2479 ntBASIC14.43□□□□□ -0.1
OtofQ9ESF1 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
OtofQ9ESF1 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
OtofQ9ESF1 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
OtofQ9ESF1 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
OtofQ9ESF1 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
OtofQ9ESF1 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
OtofQ9ESF1 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
OtofQ9ESF1 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
OtofQ9ESF1 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
OtofQ9ESF1 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms