Protein–RNA interactions for Protein: Q9EQG9

Col4a3bp, Collagen type IV alpha-3-binding protein, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3bpQ9EQG9 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col4a3bpQ9EQG9 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col4a3bpQ9EQG9 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col4a3bpQ9EQG9 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col4a3bpQ9EQG9 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col4a3bpQ9EQG9 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col4a3bpQ9EQG9 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Col4a3bpQ9EQG9 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col4a3bpQ9EQG9 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col4a3bpQ9EQG9 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col4a3bpQ9EQG9 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col4a3bpQ9EQG9 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Col4a3bpQ9EQG9 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC16.8■□□□□ 0.28
Col4a3bpQ9EQG9 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Col4a3bpQ9EQG9 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col4a3bpQ9EQG9 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC16.8■□□□□ 0.28
Col4a3bpQ9EQG9 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col4a3bpQ9EQG9 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col4a3bpQ9EQG9 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Col4a3bpQ9EQG9 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col4a3bpQ9EQG9 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col4a3bpQ9EQG9 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col4a3bpQ9EQG9 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC16.8■□□□□ 0.28
Col4a3bpQ9EQG9 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col4a3bpQ9EQG9 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC16.8■□□□□ 0.28
Col4a3bpQ9EQG9 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC16.8■□□□□ 0.28
Col4a3bpQ9EQG9 Gm8749-201ENSMUST00000117737 331 ntBASIC16.8■□□□□ 0.28
Col4a3bpQ9EQG9 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC16.8■□□□□ 0.28
Col4a3bpQ9EQG9 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Col4a3bpQ9EQG9 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Col4a3bpQ9EQG9 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC16.8■□□□□ 0.28
Col4a3bpQ9EQG9 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC16.8■□□□□ 0.28
Col4a3bpQ9EQG9 Bloc1s5-203ENSMUST00000224902 612 ntBASIC16.8■□□□□ 0.28
Col4a3bpQ9EQG9 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC16.8■□□□□ 0.28
Col4a3bpQ9EQG9 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col4a3bpQ9EQG9 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col4a3bpQ9EQG9 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col4a3bpQ9EQG9 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Col4a3bpQ9EQG9 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Col4a3bpQ9EQG9 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col4a3bpQ9EQG9 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col4a3bpQ9EQG9 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC16.8■□□□□ 0.28
Col4a3bpQ9EQG9 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC16.8■□□□□ 0.28
Col4a3bpQ9EQG9 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col4a3bpQ9EQG9 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col4a3bpQ9EQG9 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Col4a3bpQ9EQG9 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Col4a3bpQ9EQG9 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Col4a3bpQ9EQG9 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col4a3bpQ9EQG9 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col4a3bpQ9EQG9 Gm44443-201ENSMUST00000204396 5633 ntBASIC16.79■□□□□ 0.28
Col4a3bpQ9EQG9 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col4a3bpQ9EQG9 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col4a3bpQ9EQG9 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col4a3bpQ9EQG9 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Col4a3bpQ9EQG9 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Col4a3bpQ9EQG9 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC16.79■□□□□ 0.28
Col4a3bpQ9EQG9 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC16.79■□□□□ 0.28
Col4a3bpQ9EQG9 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Col4a3bpQ9EQG9 AC225888.1-201ENSMUST00000227184 728 ntBASIC16.79■□□□□ 0.28
Col4a3bpQ9EQG9 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col4a3bpQ9EQG9 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col4a3bpQ9EQG9 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC16.79■□□□□ 0.28
Col4a3bpQ9EQG9 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Col4a3bpQ9EQG9 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Col4a3bpQ9EQG9 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col4a3bpQ9EQG9 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
Col4a3bpQ9EQG9 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col4a3bpQ9EQG9 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col4a3bpQ9EQG9 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Col4a3bpQ9EQG9 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col4a3bpQ9EQG9 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col4a3bpQ9EQG9 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Col4a3bpQ9EQG9 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col4a3bpQ9EQG9 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col4a3bpQ9EQG9 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col4a3bpQ9EQG9 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col4a3bpQ9EQG9 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col4a3bpQ9EQG9 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
Col4a3bpQ9EQG9 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col4a3bpQ9EQG9 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col4a3bpQ9EQG9 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col4a3bpQ9EQG9 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Col4a3bpQ9EQG9 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC16.78■□□□□ 0.28
Col4a3bpQ9EQG9 Gm25911-201ENSMUST00000157621 56 ntBASIC16.78■□□□□ 0.28
Col4a3bpQ9EQG9 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC16.78■□□□□ 0.28
Col4a3bpQ9EQG9 AC159295.1-201ENSMUST00000225326 940 ntBASIC16.78■□□□□ 0.28
Col4a3bpQ9EQG9 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col4a3bpQ9EQG9 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col4a3bpQ9EQG9 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Col4a3bpQ9EQG9 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col4a3bpQ9EQG9 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col4a3bpQ9EQG9 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC16.78■□□□□ 0.28
Col4a3bpQ9EQG9 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col4a3bpQ9EQG9 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col4a3bpQ9EQG9 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Col4a3bpQ9EQG9 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC16.78■□□□□ 0.28
Col4a3bpQ9EQG9 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC16.78■□□□□ 0.28
Col4a3bpQ9EQG9 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col4a3bpQ9EQG9 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms