Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Gm12621-201ENSMUST00000177760 382 ntBASIC15.49■□□□□ 0.07
Lysmd1Q9D0E3 Gm12615-201ENSMUST00000177970 382 ntBASIC15.49■□□□□ 0.07
Lysmd1Q9D0E3 Gm12622-201ENSMUST00000177975 382 ntBASIC15.49■□□□□ 0.07
Lysmd1Q9D0E3 Gm12627-201ENSMUST00000178412 382 ntBASIC15.49■□□□□ 0.07
Lysmd1Q9D0E3 Gm12625-201ENSMUST00000179122 382 ntBASIC15.49■□□□□ 0.07
Lysmd1Q9D0E3 Gm12614-201ENSMUST00000179586 382 ntBASIC15.49■□□□□ 0.07
Lysmd1Q9D0E3 Gm12613-201ENSMUST00000180323 382 ntBASIC15.49■□□□□ 0.07
Lysmd1Q9D0E3 Gm44397-201ENSMUST00000195950 113 ntBASIC15.49■□□□□ 0.07
Lysmd1Q9D0E3 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC15.49■□□□□ 0.07
Lysmd1Q9D0E3 AC121598.1-201ENSMUST00000228224 1019 ntBASIC15.49■□□□□ 0.07
Lysmd1Q9D0E3 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Lysmd1Q9D0E3 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Lysmd1Q9D0E3 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Lysmd1Q9D0E3 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Lysmd1Q9D0E3 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Lysmd1Q9D0E3 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC15.49■□□□□ 0.07
Lysmd1Q9D0E3 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Lysmd1Q9D0E3 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Lysmd1Q9D0E3 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Lysmd1Q9D0E3 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Lysmd1Q9D0E3 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Lysmd1Q9D0E3 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC15.48■□□□□ 0.07
Lysmd1Q9D0E3 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC15.48■□□□□ 0.07
Lysmd1Q9D0E3 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Lysmd1Q9D0E3 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Lysmd1Q9D0E3 Gm11841-201ENSMUST00000117060 1963 ntBASIC15.48■□□□□ 0.07
Lysmd1Q9D0E3 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Lysmd1Q9D0E3 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC15.48■□□□□ 0.07
Lysmd1Q9D0E3 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Lysmd1Q9D0E3 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Lysmd1Q9D0E3 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC15.48■□□□□ 0.07
Lysmd1Q9D0E3 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC15.48■□□□□ 0.07
Lysmd1Q9D0E3 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Lysmd1Q9D0E3 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Lysmd1Q9D0E3 Gm2260-201ENSMUST00000184965 657 ntBASIC15.48■□□□□ 0.07
Lysmd1Q9D0E3 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC15.48■□□□□ 0.07
Lysmd1Q9D0E3 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC15.48■□□□□ 0.07
Lysmd1Q9D0E3 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Lysmd1Q9D0E3 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Lysmd1Q9D0E3 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Lysmd1Q9D0E3 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Lysmd1Q9D0E3 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Lysmd1Q9D0E3 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Lysmd1Q9D0E3 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Lysmd1Q9D0E3 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Lysmd1Q9D0E3 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Lysmd1Q9D0E3 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Lysmd1Q9D0E3 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Lysmd1Q9D0E3 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Lysmd1Q9D0E3 Gm37812-201ENSMUST00000195216 2475 ntBASIC15.48■□□□□ 0.07
Lysmd1Q9D0E3 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Lysmd1Q9D0E3 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Lysmd1Q9D0E3 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Lysmd1Q9D0E3 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Lysmd1Q9D0E3 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
Lysmd1Q9D0E3 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Lysmd1Q9D0E3 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
Lysmd1Q9D0E3 Gm38327-201ENSMUST00000195852 1755 ntBASIC15.47■□□□□ 0.07
Lysmd1Q9D0E3 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Lysmd1Q9D0E3 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Lysmd1Q9D0E3 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
Lysmd1Q9D0E3 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
Lysmd1Q9D0E3 Gm15240-201ENSMUST00000118156 720 ntBASIC15.47■□□□□ 0.07
Lysmd1Q9D0E3 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Lysmd1Q9D0E3 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC15.47■□□□□ 0.07
Lysmd1Q9D0E3 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Lysmd1Q9D0E3 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC15.47■□□□□ 0.07
Lysmd1Q9D0E3 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Lysmd1Q9D0E3 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Lysmd1Q9D0E3 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Lysmd1Q9D0E3 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC15.47■□□□□ 0.07
Lysmd1Q9D0E3 Gm45186-201ENSMUST00000206874 478 ntBASIC15.47■□□□□ 0.07
Lysmd1Q9D0E3 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC15.47■□□□□ 0.07
Lysmd1Q9D0E3 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC15.47■□□□□ 0.07
Lysmd1Q9D0E3 AC154462.2-201ENSMUST00000227519 370 ntBASIC15.47■□□□□ 0.07
Lysmd1Q9D0E3 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Lysmd1Q9D0E3 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Lysmd1Q9D0E3 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Lysmd1Q9D0E3 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Lysmd1Q9D0E3 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC15.47■□□□□ 0.07
Lysmd1Q9D0E3 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC15.47■□□□□ 0.07
Lysmd1Q9D0E3 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Lysmd1Q9D0E3 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Lysmd1Q9D0E3 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Lysmd1Q9D0E3 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Lysmd1Q9D0E3 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC15.46■□□□□ 0.07
Lysmd1Q9D0E3 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Lysmd1Q9D0E3 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Lysmd1Q9D0E3 Gm6598-201ENSMUST00000202719 2615 ntBASIC15.46■□□□□ 0.07
Lysmd1Q9D0E3 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Lysmd1Q9D0E3 Mir1943-201ENSMUST00000158276 73 ntBASIC15.46■□□□□ 0.07
Lysmd1Q9D0E3 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC15.46■□□□□ 0.07
Lysmd1Q9D0E3 Gm4271-201ENSMUST00000174444 973 ntBASIC15.46■□□□□ 0.07
Lysmd1Q9D0E3 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Lysmd1Q9D0E3 Gm7467-201ENSMUST00000185173 652 ntBASIC15.46■□□□□ 0.07
Lysmd1Q9D0E3 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Lysmd1Q9D0E3 Gm37230-201ENSMUST00000194491 818 ntBASIC15.46■□□□□ 0.07
Lysmd1Q9D0E3 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC15.46■□□□□ 0.07
Lysmd1Q9D0E3 AC139350.3-201ENSMUST00000226151 420 ntBASIC15.46■□□□□ 0.07
Lysmd1Q9D0E3 Gm14267-206ENSMUST00000226870 1209 ntBASIC15.46■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 74.2 ms