Protein–RNA interactions for Protein: Q9CZ28

Snf8, Vacuolar-sorting protein SNF8, mousemouse

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snf8Q9CZ28 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Snf8Q9CZ28 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Snf8Q9CZ28 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Snf8Q9CZ28 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Snf8Q9CZ28 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Snf8Q9CZ28 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Snf8Q9CZ28 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Snf8Q9CZ28 AC130669.1-201ENSMUST00000228537 1672 ntBASIC15.12■□□□□ 0.01
Snf8Q9CZ28 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Snf8Q9CZ28 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Snf8Q9CZ28 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Snf8Q9CZ28 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Snf8Q9CZ28 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Snf8Q9CZ28 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Snf8Q9CZ28 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Snf8Q9CZ28 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Snf8Q9CZ28 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Snf8Q9CZ28 AC159649.2-201ENSMUST00000222984 3223 ntBASIC15.11■□□□□ 0.01
Snf8Q9CZ28 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Snf8Q9CZ28 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Snf8Q9CZ28 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Snf8Q9CZ28 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Snf8Q9CZ28 Gm37500-201ENSMUST00000192059 1443 ntBASIC15.11■□□□□ 0.01
Snf8Q9CZ28 Gm4081-201ENSMUST00000195287 1838 ntBASIC15.11■□□□□ 0.01
Snf8Q9CZ28 AC166574.6-201ENSMUST00000227889 1806 ntBASIC15.11■□□□□ 0.01
Snf8Q9CZ28 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Snf8Q9CZ28 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Snf8Q9CZ28 Gm44357-201ENSMUST00000195897 142 ntBASIC15.11■□□□□ 0.01
Snf8Q9CZ28 Gm19658-201ENSMUST00000196231 138 ntBASIC15.11■□□□□ 0.01
Snf8Q9CZ28 Gm44367-201ENSMUST00000196836 138 ntBASIC15.11■□□□□ 0.01
Snf8Q9CZ28 Gm44350-201ENSMUST00000197197 138 ntBASIC15.11■□□□□ 0.01
Snf8Q9CZ28 Gm44390-201ENSMUST00000197533 144 ntBASIC15.11■□□□□ 0.01
Snf8Q9CZ28 Gm44313-201ENSMUST00000198018 138 ntBASIC15.11■□□□□ 0.01
Snf8Q9CZ28 Gm44486-201ENSMUST00000198508 138 ntBASIC15.11■□□□□ 0.01
Snf8Q9CZ28 Gm44314-201ENSMUST00000199263 138 ntBASIC15.11■□□□□ 0.01
Snf8Q9CZ28 Gm44394-201ENSMUST00000199558 138 ntBASIC15.11■□□□□ 0.01
Snf8Q9CZ28 Gm44484-201ENSMUST00000199873 138 ntBASIC15.11■□□□□ 0.01
Snf8Q9CZ28 Gm44466-201ENSMUST00000200264 138 ntBASIC15.11■□□□□ 0.01
Snf8Q9CZ28 Gm44359-201ENSMUST00000200671 138 ntBASIC15.11■□□□□ 0.01
Snf8Q9CZ28 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC15.11■□□□□ 0.01
Snf8Q9CZ28 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Snf8Q9CZ28 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Snf8Q9CZ28 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Snf8Q9CZ28 Gm14451-201ENSMUST00000121581 1542 ntBASIC15.11■□□□□ 0.01
Snf8Q9CZ28 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Snf8Q9CZ28 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Snf8Q9CZ28 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC15.11■□□□□ 0.01
Snf8Q9CZ28 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Snf8Q9CZ28 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Snf8Q9CZ28 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Snf8Q9CZ28 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Snf8Q9CZ28 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Snf8Q9CZ28 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Snf8Q9CZ28 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Snf8Q9CZ28 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Snf8Q9CZ28 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Snf8Q9CZ28 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Snf8Q9CZ28 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Snf8Q9CZ28 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Snf8Q9CZ28 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Snf8Q9CZ28 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
Snf8Q9CZ28 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC15.1■□□□□ 0.01
Snf8Q9CZ28 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Snf8Q9CZ28 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC15.1■□□□□ 0.01
Snf8Q9CZ28 Gm7787-201ENSMUST00000216858 688 ntBASIC15.1■□□□□ 0.01
Snf8Q9CZ28 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Snf8Q9CZ28 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC15.1■□□□□ 0.01
Snf8Q9CZ28 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Snf8Q9CZ28 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Snf8Q9CZ28 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Snf8Q9CZ28 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Snf8Q9CZ28 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Snf8Q9CZ28 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
Snf8Q9CZ28 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC15.1■□□□□ 0.01
Snf8Q9CZ28 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Snf8Q9CZ28 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Snf8Q9CZ28 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Snf8Q9CZ28 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Snf8Q9CZ28 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Snf8Q9CZ28 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Snf8Q9CZ28 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC15.09■□□□□ 0.01
Snf8Q9CZ28 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Snf8Q9CZ28 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Snf8Q9CZ28 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Snf8Q9CZ28 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Snf8Q9CZ28 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Snf8Q9CZ28 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Snf8Q9CZ28 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
Snf8Q9CZ28 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
Snf8Q9CZ28 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Snf8Q9CZ28 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC15.09■□□□□ 0.01
Snf8Q9CZ28 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Snf8Q9CZ28 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Snf8Q9CZ28 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Snf8Q9CZ28 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Snf8Q9CZ28 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC15.09■□□□□ 0.01
Snf8Q9CZ28 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Snf8Q9CZ28 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Snf8Q9CZ28 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Snf8Q9CZ28 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms