Protein–RNA interactions for Protein: Q9CWX9

Ddx47, Probable ATP-dependent RNA helicase DDX47, mousemouse

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx47Q9CWX9 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ddx47Q9CWX9 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ddx47Q9CWX9 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ddx47Q9CWX9 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ddx47Q9CWX9 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ddx47Q9CWX9 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ddx47Q9CWX9 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Ddx47Q9CWX9 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Ddx47Q9CWX9 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Ddx47Q9CWX9 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC15.1■□□□□ 0.01
Ddx47Q9CWX9 Gm7506-201ENSMUST00000207758 815 ntBASIC15.1■□□□□ 0.01
Ddx47Q9CWX9 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ddx47Q9CWX9 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ddx47Q9CWX9 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ddx47Q9CWX9 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ddx47Q9CWX9 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ddx47Q9CWX9 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ddx47Q9CWX9 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ddx47Q9CWX9 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ddx47Q9CWX9 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ddx47Q9CWX9 Gm43364-201ENSMUST00000196046 3274 ntBASIC15.09■□□□□ 0.01
Ddx47Q9CWX9 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ddx47Q9CWX9 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ddx47Q9CWX9 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ddx47Q9CWX9 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ddx47Q9CWX9 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ddx47Q9CWX9 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ddx47Q9CWX9 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ddx47Q9CWX9 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ddx47Q9CWX9 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ddx47Q9CWX9 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ddx47Q9CWX9 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ddx47Q9CWX9 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ddx47Q9CWX9 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ddx47Q9CWX9 Gm17808-201ENSMUST00000200859 894 ntBASIC15.09■□□□□ 0.01
Ddx47Q9CWX9 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ddx47Q9CWX9 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC15.09■□□□□ 0.01
Ddx47Q9CWX9 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC15.09■□□□□ 0.01
Ddx47Q9CWX9 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ddx47Q9CWX9 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Ddx47Q9CWX9 Gm5639-201ENSMUST00000122305 2403 ntBASIC15.09■□□□□ 0.01
Ddx47Q9CWX9 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC15.09■□□□□ 0.01
Ddx47Q9CWX9 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ddx47Q9CWX9 Ntrk2-208ENSMUST00000225583 2719 ntBASIC15.09■□□□□ 0.01
Ddx47Q9CWX9 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ddx47Q9CWX9 Gm45003-201ENSMUST00000205875 2158 ntBASIC15.09■□□□□ 0.01
Ddx47Q9CWX9 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ddx47Q9CWX9 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ddx47Q9CWX9 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ddx47Q9CWX9 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ddx47Q9CWX9 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC15.09■□□□□ 0.01
Ddx47Q9CWX9 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ddx47Q9CWX9 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
Ddx47Q9CWX9 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Ddx47Q9CWX9 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Ddx47Q9CWX9 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Ddx47Q9CWX9 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC15.08■□□□□ 0.01
Ddx47Q9CWX9 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Ddx47Q9CWX9 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Ddx47Q9CWX9 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC15.08■□□□□ 0.01
Ddx47Q9CWX9 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ddx47Q9CWX9 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Ddx47Q9CWX9 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ddx47Q9CWX9 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Ddx47Q9CWX9 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ddx47Q9CWX9 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
Ddx47Q9CWX9 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ddx47Q9CWX9 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Ddx47Q9CWX9 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC15.08■□□□□ 0
Ddx47Q9CWX9 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC15.08■□□□□ 0
Ddx47Q9CWX9 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC15.08■□□□□ 0
Ddx47Q9CWX9 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ddx47Q9CWX9 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC15.08■□□□□ 0
Ddx47Q9CWX9 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ddx47Q9CWX9 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ddx47Q9CWX9 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ddx47Q9CWX9 AC121805.2-201ENSMUST00000218808 2538 ntBASIC15.08■□□□□ 0
Ddx47Q9CWX9 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ddx47Q9CWX9 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ddx47Q9CWX9 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ddx47Q9CWX9 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC15.08■□□□□ 0
Ddx47Q9CWX9 Gm8258-201ENSMUST00000055593 1449 ntBASIC15.08■□□□□ 0
Ddx47Q9CWX9 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ddx47Q9CWX9 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Ddx47Q9CWX9 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Ddx47Q9CWX9 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC15.07■□□□□ 0
Ddx47Q9CWX9 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Ddx47Q9CWX9 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ddx47Q9CWX9 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ddx47Q9CWX9 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Ddx47Q9CWX9 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Ddx47Q9CWX9 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ddx47Q9CWX9 Gm15165-201ENSMUST00000118140 502 ntBASIC15.07■□□□□ 0
Ddx47Q9CWX9 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC15.07■□□□□ 0
Ddx47Q9CWX9 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ddx47Q9CWX9 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC15.07■□□□□ 0
Ddx47Q9CWX9 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ddx47Q9CWX9 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC15.07■□□□□ 0
Ddx47Q9CWX9 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ddx47Q9CWX9 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms