Protein–RNA interactions for Protein: Q9CQE1

Nipsnap3b, Protein NipSnap homolog 3B, mousemouse

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nipsnap3bQ9CQE1 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Nipsnap3bQ9CQE1 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nipsnap3bQ9CQE1 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nipsnap3bQ9CQE1 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Nipsnap3bQ9CQE1 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nipsnap3bQ9CQE1 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nipsnap3bQ9CQE1 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nipsnap3bQ9CQE1 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.48□□□□□ -0.09
Nipsnap3bQ9CQE1 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nipsnap3bQ9CQE1 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nipsnap3bQ9CQE1 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nipsnap3bQ9CQE1 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Nipsnap3bQ9CQE1 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
Nipsnap3bQ9CQE1 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nipsnap3bQ9CQE1 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nipsnap3bQ9CQE1 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nipsnap3bQ9CQE1 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Nipsnap3bQ9CQE1 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nipsnap3bQ9CQE1 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Nipsnap3bQ9CQE1 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nipsnap3bQ9CQE1 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Nipsnap3bQ9CQE1 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nipsnap3bQ9CQE1 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nipsnap3bQ9CQE1 Gm11452-201ENSMUST00000122376 690 ntBASIC14.47□□□□□ -0.09
Nipsnap3bQ9CQE1 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Nipsnap3bQ9CQE1 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Nipsnap3bQ9CQE1 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC14.47□□□□□ -0.09
Nipsnap3bQ9CQE1 Gm43935-201ENSMUST00000203569 1050 ntBASIC14.47□□□□□ -0.09
Nipsnap3bQ9CQE1 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nipsnap3bQ9CQE1 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Nipsnap3bQ9CQE1 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC14.47□□□□□ -0.09
Nipsnap3bQ9CQE1 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Nipsnap3bQ9CQE1 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.47□□□□□ -0.09
Nipsnap3bQ9CQE1 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nipsnap3bQ9CQE1 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Nipsnap3bQ9CQE1 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
Nipsnap3bQ9CQE1 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nipsnap3bQ9CQE1 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Nipsnap3bQ9CQE1 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nipsnap3bQ9CQE1 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nipsnap3bQ9CQE1 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nipsnap3bQ9CQE1 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Nipsnap3bQ9CQE1 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Nipsnap3bQ9CQE1 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Nipsnap3bQ9CQE1 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nipsnap3bQ9CQE1 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Nipsnap3bQ9CQE1 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nipsnap3bQ9CQE1 Gm44645-201ENSMUST00000205492 1653 ntBASIC14.46□□□□□ -0.09
Nipsnap3bQ9CQE1 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Nipsnap3bQ9CQE1 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Nipsnap3bQ9CQE1 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nipsnap3bQ9CQE1 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nipsnap3bQ9CQE1 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nipsnap3bQ9CQE1 Gm4899-201ENSMUST00000178708 719 ntBASIC14.46□□□□□ -0.09
Nipsnap3bQ9CQE1 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nipsnap3bQ9CQE1 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Nipsnap3bQ9CQE1 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nipsnap3bQ9CQE1 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nipsnap3bQ9CQE1 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Nipsnap3bQ9CQE1 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nipsnap3bQ9CQE1 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nipsnap3bQ9CQE1 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC14.46□□□□□ -0.1
Nipsnap3bQ9CQE1 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Nipsnap3bQ9CQE1 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Nipsnap3bQ9CQE1 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Nipsnap3bQ9CQE1 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.1
Nipsnap3bQ9CQE1 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nipsnap3bQ9CQE1 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Nipsnap3bQ9CQE1 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nipsnap3bQ9CQE1 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nipsnap3bQ9CQE1 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nipsnap3bQ9CQE1 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC14.45□□□□□ -0.1
Nipsnap3bQ9CQE1 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nipsnap3bQ9CQE1 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nipsnap3bQ9CQE1 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nipsnap3bQ9CQE1 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nipsnap3bQ9CQE1 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC14.45□□□□□ -0.1
Nipsnap3bQ9CQE1 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nipsnap3bQ9CQE1 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Nipsnap3bQ9CQE1 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Nipsnap3bQ9CQE1 Gm10459-201ENSMUST00000202708 1155 ntBASIC14.45□□□□□ -0.1
Nipsnap3bQ9CQE1 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nipsnap3bQ9CQE1 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC14.45□□□□□ -0.1
Nipsnap3bQ9CQE1 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nipsnap3bQ9CQE1 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nipsnap3bQ9CQE1 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Nipsnap3bQ9CQE1 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nipsnap3bQ9CQE1 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Nipsnap3bQ9CQE1 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nipsnap3bQ9CQE1 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nipsnap3bQ9CQE1 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nipsnap3bQ9CQE1 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nipsnap3bQ9CQE1 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nipsnap3bQ9CQE1 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Nipsnap3bQ9CQE1 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC14.45□□□□□ -0.1
Nipsnap3bQ9CQE1 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nipsnap3bQ9CQE1 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nipsnap3bQ9CQE1 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nipsnap3bQ9CQE1 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Nipsnap3bQ9CQE1 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms