Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Krt88Q9CPR6 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Krt88Q9CPR6 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC13.26□□□□□ -0.29
Krt88Q9CPR6 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Krt88Q9CPR6 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Krt88Q9CPR6 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Krt88Q9CPR6 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Krt88Q9CPR6 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Krt88Q9CPR6 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Krt88Q9CPR6 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Krt88Q9CPR6 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Krt88Q9CPR6 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Krt88Q9CPR6 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Krt88Q9CPR6 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.25□□□□□ -0.29
Krt88Q9CPR6 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Krt88Q9CPR6 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Krt88Q9CPR6 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Krt88Q9CPR6 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Krt88Q9CPR6 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Krt88Q9CPR6 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Krt88Q9CPR6 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC13.25□□□□□ -0.29
Krt88Q9CPR6 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Krt88Q9CPR6 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Krt88Q9CPR6 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Krt88Q9CPR6 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Krt88Q9CPR6 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
Krt88Q9CPR6 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Krt88Q9CPR6 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Krt88Q9CPR6 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC13.25□□□□□ -0.29
Krt88Q9CPR6 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Krt88Q9CPR6 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Krt88Q9CPR6 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC13.25□□□□□ -0.29
Krt88Q9CPR6 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Krt88Q9CPR6 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Krt88Q9CPR6 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Krt88Q9CPR6 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
Krt88Q9CPR6 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Krt88Q9CPR6 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Krt88Q9CPR6 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Krt88Q9CPR6 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Krt88Q9CPR6 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
Krt88Q9CPR6 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Krt88Q9CPR6 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Krt88Q9CPR6 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
Krt88Q9CPR6 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Krt88Q9CPR6 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Krt88Q9CPR6 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Krt88Q9CPR6 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Krt88Q9CPR6 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Krt88Q9CPR6 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Krt88Q9CPR6 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Krt88Q9CPR6 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC13.24□□□□□ -0.29
Krt88Q9CPR6 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Krt88Q9CPR6 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC13.24□□□□□ -0.29
Krt88Q9CPR6 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Krt88Q9CPR6 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Krt88Q9CPR6 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Krt88Q9CPR6 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC13.24□□□□□ -0.29
Krt88Q9CPR6 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Krt88Q9CPR6 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Krt88Q9CPR6 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Krt88Q9CPR6 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Krt88Q9CPR6 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Krt88Q9CPR6 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Krt88Q9CPR6 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Krt88Q9CPR6 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Krt88Q9CPR6 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC13.24□□□□□ -0.29
Krt88Q9CPR6 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC13.24□□□□□ -0.29
Krt88Q9CPR6 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
Krt88Q9CPR6 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Krt88Q9CPR6 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC13.23□□□□□ -0.29
Krt88Q9CPR6 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Krt88Q9CPR6 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Krt88Q9CPR6 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Krt88Q9CPR6 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Krt88Q9CPR6 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Krt88Q9CPR6 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Krt88Q9CPR6 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Krt88Q9CPR6 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Krt88Q9CPR6 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.23□□□□□ -0.29
Krt88Q9CPR6 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC13.23□□□□□ -0.29
Krt88Q9CPR6 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC13.23□□□□□ -0.29
Krt88Q9CPR6 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC13.23□□□□□ -0.29
Krt88Q9CPR6 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Krt88Q9CPR6 Gm27867-201ENSMUST00000184778 125 ntBASIC13.23□□□□□ -0.29
Krt88Q9CPR6 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC13.23□□□□□ -0.29
Krt88Q9CPR6 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC13.23□□□□□ -0.29
Krt88Q9CPR6 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Krt88Q9CPR6 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Krt88Q9CPR6 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Krt88Q9CPR6 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Krt88Q9CPR6 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC13.23□□□□□ -0.29
Krt88Q9CPR6 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Krt88Q9CPR6 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Krt88Q9CPR6 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC13.23□□□□□ -0.29
Krt88Q9CPR6 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Krt88Q9CPR6 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Krt88Q9CPR6 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Krt88Q9CPR6 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Krt88Q9CPR6 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms