Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim34aQ99PP6 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Trim34aQ99PP6 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Trim34aQ99PP6 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Trim34aQ99PP6 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
Trim34aQ99PP6 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Trim34aQ99PP6 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Trim34aQ99PP6 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim34aQ99PP6 Ldb3-207ENSMUST00000227819 1499 ntBASIC18.01■□□□□ 0.47
Trim34aQ99PP6 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Trim34aQ99PP6 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trim34aQ99PP6 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim34aQ99PP6 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim34aQ99PP6 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim34aQ99PP6 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim34aQ99PP6 Gm8515-201ENSMUST00000194852 576 ntBASIC18.01■□□□□ 0.47
Trim34aQ99PP6 Gm43438-201ENSMUST00000198133 379 ntBASIC18.01■□□□□ 0.47
Trim34aQ99PP6 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC18.01■□□□□ 0.47
Trim34aQ99PP6 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim34aQ99PP6 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Trim34aQ99PP6 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC18.01■□□□□ 0.47
Trim34aQ99PP6 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim34aQ99PP6 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim34aQ99PP6 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim34aQ99PP6 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim34aQ99PP6 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim34aQ99PP6 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Trim34aQ99PP6 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trim34aQ99PP6 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trim34aQ99PP6 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Trim34aQ99PP6 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Trim34aQ99PP6 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trim34aQ99PP6 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC18■□□□□ 0.47
Trim34aQ99PP6 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Trim34aQ99PP6 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trim34aQ99PP6 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC18■□□□□ 0.47
Trim34aQ99PP6 Gm14042-201ENSMUST00000120139 833 ntBASIC18■□□□□ 0.47
Trim34aQ99PP6 Gm7820-201ENSMUST00000121012 1052 ntBASIC18■□□□□ 0.47
Trim34aQ99PP6 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Trim34aQ99PP6 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC18■□□□□ 0.47
Trim34aQ99PP6 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC18■□□□□ 0.47
Trim34aQ99PP6 Gm6745-201ENSMUST00000199216 526 ntBASIC18■□□□□ 0.47
Trim34aQ99PP6 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC18■□□□□ 0.47
Trim34aQ99PP6 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
Trim34aQ99PP6 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC18■□□□□ 0.47
Trim34aQ99PP6 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC18■□□□□ 0.47
Trim34aQ99PP6 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC18■□□□□ 0.47
Trim34aQ99PP6 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Trim34aQ99PP6 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trim34aQ99PP6 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC18■□□□□ 0.47
Trim34aQ99PP6 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trim34aQ99PP6 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Trim34aQ99PP6 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trim34aQ99PP6 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim34aQ99PP6 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim34aQ99PP6 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim34aQ99PP6 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC17.99■□□□□ 0.47
Trim34aQ99PP6 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Trim34aQ99PP6 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.99■□□□□ 0.47
Trim34aQ99PP6 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim34aQ99PP6 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trim34aQ99PP6 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim34aQ99PP6 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim34aQ99PP6 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trim34aQ99PP6 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trim34aQ99PP6 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC17.99■□□□□ 0.47
Trim34aQ99PP6 Gm23984-201ENSMUST00000157139 203 ntBASIC17.99■□□□□ 0.47
Trim34aQ99PP6 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC17.99■□□□□ 0.47
Trim34aQ99PP6 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC17.99■□□□□ 0.47
Trim34aQ99PP6 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim34aQ99PP6 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim34aQ99PP6 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Trim34aQ99PP6 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Trim34aQ99PP6 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim34aQ99PP6 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim34aQ99PP6 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trim34aQ99PP6 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim34aQ99PP6 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim34aQ99PP6 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim34aQ99PP6 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Trim34aQ99PP6 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim34aQ99PP6 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trim34aQ99PP6 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim34aQ99PP6 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.98■□□□□ 0.47
Trim34aQ99PP6 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim34aQ99PP6 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim34aQ99PP6 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim34aQ99PP6 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim34aQ99PP6 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Trim34aQ99PP6 Sybu-209ENSMUST00000228639 4113 ntBASIC17.98■□□□□ 0.47
Trim34aQ99PP6 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Trim34aQ99PP6 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim34aQ99PP6 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim34aQ99PP6 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim34aQ99PP6 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Trim34aQ99PP6 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim34aQ99PP6 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC17.98■□□□□ 0.47
Trim34aQ99PP6 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim34aQ99PP6 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim34aQ99PP6 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC17.98■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms