Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim8Q99PJ2 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trim8Q99PJ2 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim8Q99PJ2 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC14.39□□□□□ -0.11
Trim8Q99PJ2 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC14.39□□□□□ -0.11
Trim8Q99PJ2 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim8Q99PJ2 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim8Q99PJ2 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trim8Q99PJ2 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
Trim8Q99PJ2 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim8Q99PJ2 Gm28182-201ENSMUST00000188354 2477 ntBASIC14.38□□□□□ -0.11
Trim8Q99PJ2 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim8Q99PJ2 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim8Q99PJ2 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Trim8Q99PJ2 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim8Q99PJ2 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC14.38□□□□□ -0.11
Trim8Q99PJ2 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim8Q99PJ2 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim8Q99PJ2 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim8Q99PJ2 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim8Q99PJ2 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim8Q99PJ2 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC14.38□□□□□ -0.11
Trim8Q99PJ2 Gm5682-201ENSMUST00000173402 505 ntBASIC14.38□□□□□ -0.11
Trim8Q99PJ2 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim8Q99PJ2 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim8Q99PJ2 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim8Q99PJ2 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim8Q99PJ2 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim8Q99PJ2 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim8Q99PJ2 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim8Q99PJ2 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim8Q99PJ2 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim8Q99PJ2 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim8Q99PJ2 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim8Q99PJ2 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim8Q99PJ2 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim8Q99PJ2 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim8Q99PJ2 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Trim8Q99PJ2 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim8Q99PJ2 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim8Q99PJ2 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim8Q99PJ2 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Trim8Q99PJ2 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim8Q99PJ2 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
Trim8Q99PJ2 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim8Q99PJ2 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim8Q99PJ2 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC14.37□□□□□ -0.11
Trim8Q99PJ2 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC14.37□□□□□ -0.11
Trim8Q99PJ2 Gm2308-201ENSMUST00000166539 1004 ntBASIC14.37□□□□□ -0.11
Trim8Q99PJ2 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC14.37□□□□□ -0.11
Trim8Q99PJ2 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim8Q99PJ2 Gm4535-201ENSMUST00000182274 558 ntBASIC14.37□□□□□ -0.11
Trim8Q99PJ2 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim8Q99PJ2 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC14.37□□□□□ -0.11
Trim8Q99PJ2 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim8Q99PJ2 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim8Q99PJ2 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim8Q99PJ2 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim8Q99PJ2 Gm10355-201ENSMUST00000097146 517 ntBASIC14.37□□□□□ -0.11
Trim8Q99PJ2 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Trim8Q99PJ2 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim8Q99PJ2 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim8Q99PJ2 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim8Q99PJ2 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Trim8Q99PJ2 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Trim8Q99PJ2 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim8Q99PJ2 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Trim8Q99PJ2 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim8Q99PJ2 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim8Q99PJ2 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC14.37□□□□□ -0.11
Trim8Q99PJ2 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim8Q99PJ2 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim8Q99PJ2 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim8Q99PJ2 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim8Q99PJ2 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trim8Q99PJ2 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC14.36□□□□□ -0.11
Trim8Q99PJ2 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim8Q99PJ2 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trim8Q99PJ2 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim8Q99PJ2 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim8Q99PJ2 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim8Q99PJ2 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim8Q99PJ2 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim8Q99PJ2 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim8Q99PJ2 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC14.36□□□□□ -0.11
Trim8Q99PJ2 AC159301.1-201ENSMUST00000225130 1182 ntBASIC14.36□□□□□ -0.11
Trim8Q99PJ2 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC14.36□□□□□ -0.11
Trim8Q99PJ2 AC151836.1-202ENSMUST00000226259 753 ntBASIC14.36□□□□□ -0.11
Trim8Q99PJ2 Birc2-201ENSMUST00000054878 378 ntBASIC14.36□□□□□ -0.11
Trim8Q99PJ2 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim8Q99PJ2 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trim8Q99PJ2 Gm43056-201ENSMUST00000197865 2791 ntBASIC14.36□□□□□ -0.11
Trim8Q99PJ2 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Trim8Q99PJ2 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim8Q99PJ2 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim8Q99PJ2 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC14.36□□□□□ -0.11
Trim8Q99PJ2 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Trim8Q99PJ2 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim8Q99PJ2 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trim8Q99PJ2 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms