Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Gm11425-201ENSMUST00000119608 498 ntBASIC13.72□□□□□ -0.21
Nkx6-1Q99MA9 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx6-1Q99MA9 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC13.72□□□□□ -0.21
Nkx6-1Q99MA9 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx6-1Q99MA9 Gm45098-201ENSMUST00000207179 657 ntBASIC13.72□□□□□ -0.21
Nkx6-1Q99MA9 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx6-1Q99MA9 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Nkx6-1Q99MA9 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Nkx6-1Q99MA9 Gm9396-201ENSMUST00000076703 567 ntBASIC13.72□□□□□ -0.21
Nkx6-1Q99MA9 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx6-1Q99MA9 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx6-1Q99MA9 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx6-1Q99MA9 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx6-1Q99MA9 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx6-1Q99MA9 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx6-1Q99MA9 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx6-1Q99MA9 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx6-1Q99MA9 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Nkx6-1Q99MA9 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx6-1Q99MA9 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx6-1Q99MA9 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Nkx6-1Q99MA9 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Nkx6-1Q99MA9 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx6-1Q99MA9 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx6-1Q99MA9 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC13.72□□□□□ -0.21
Nkx6-1Q99MA9 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC13.72□□□□□ -0.21
Nkx6-1Q99MA9 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx6-1Q99MA9 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx6-1Q99MA9 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nkx6-1Q99MA9 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nkx6-1Q99MA9 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nkx6-1Q99MA9 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nkx6-1Q99MA9 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nkx6-1Q99MA9 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Nkx6-1Q99MA9 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nkx6-1Q99MA9 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nkx6-1Q99MA9 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Nkx6-1Q99MA9 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Nkx6-1Q99MA9 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Nkx6-1Q99MA9 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
Nkx6-1Q99MA9 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC13.71□□□□□ -0.21
Nkx6-1Q99MA9 Gm12960-201ENSMUST00000120017 1066 ntBASIC13.71□□□□□ -0.21
Nkx6-1Q99MA9 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC13.71□□□□□ -0.21
Nkx6-1Q99MA9 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC13.71□□□□□ -0.21
Nkx6-1Q99MA9 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nkx6-1Q99MA9 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nkx6-1Q99MA9 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC13.71□□□□□ -0.21
Nkx6-1Q99MA9 Gm21854-201ENSMUST00000179901 471 ntBASIC13.71□□□□□ -0.21
Nkx6-1Q99MA9 AY702102-202ENSMUST00000194651 1173 ntBASIC13.71□□□□□ -0.21
Nkx6-1Q99MA9 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Nkx6-1Q99MA9 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC13.71□□□□□ -0.21
Nkx6-1Q99MA9 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Nkx6-1Q99MA9 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC13.71□□□□□ -0.21
Nkx6-1Q99MA9 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nkx6-1Q99MA9 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nkx6-1Q99MA9 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nkx6-1Q99MA9 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nkx6-1Q99MA9 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nkx6-1Q99MA9 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Nkx6-1Q99MA9 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Nkx6-1Q99MA9 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Nkx6-1Q99MA9 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Nkx6-1Q99MA9 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.22
Nkx6-1Q99MA9 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Nkx6-1Q99MA9 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Nkx6-1Q99MA9 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC13.71□□□□□ -0.22
Nkx6-1Q99MA9 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Nkx6-1Q99MA9 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Nkx6-1Q99MA9 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Nkx6-1Q99MA9 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC13.7□□□□□ -0.22
Nkx6-1Q99MA9 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx6-1Q99MA9 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx6-1Q99MA9 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx6-1Q99MA9 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC13.7□□□□□ -0.22
Nkx6-1Q99MA9 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx6-1Q99MA9 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx6-1Q99MA9 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Nkx6-1Q99MA9 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx6-1Q99MA9 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx6-1Q99MA9 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC13.7□□□□□ -0.22
Nkx6-1Q99MA9 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx6-1Q99MA9 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC13.7□□□□□ -0.22
Nkx6-1Q99MA9 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC13.7□□□□□ -0.22
Nkx6-1Q99MA9 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Nkx6-1Q99MA9 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Nkx6-1Q99MA9 AC159006.1-201ENSMUST00000226396 258 ntBASIC13.7□□□□□ -0.22
Nkx6-1Q99MA9 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx6-1Q99MA9 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Nkx6-1Q99MA9 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx6-1Q99MA9 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Nkx6-1Q99MA9 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx6-1Q99MA9 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx6-1Q99MA9 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx6-1Q99MA9 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx6-1Q99MA9 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx6-1Q99MA9 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx6-1Q99MA9 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx6-1Q99MA9 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx6-1Q99MA9 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx6-1Q99MA9 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms