Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chmp1b1Q99LU0 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chmp1b1Q99LU0 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC13.88□□□□□ -0.19
Chmp1b1Q99LU0 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
Chmp1b1Q99LU0 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chmp1b1Q99LU0 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Chmp1b1Q99LU0 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chmp1b1Q99LU0 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Chmp1b1Q99LU0 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC13.88□□□□□ -0.19
Chmp1b1Q99LU0 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC13.88□□□□□ -0.19
Chmp1b1Q99LU0 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chmp1b1Q99LU0 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
Chmp1b1Q99LU0 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chmp1b1Q99LU0 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Chmp1b1Q99LU0 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chmp1b1Q99LU0 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chmp1b1Q99LU0 AC174678.1-201ENSMUST00000228007 2749 ntBASIC13.88□□□□□ -0.19
Chmp1b1Q99LU0 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chmp1b1Q99LU0 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Chmp1b1Q99LU0 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Chmp1b1Q99LU0 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Chmp1b1Q99LU0 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chmp1b1Q99LU0 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chmp1b1Q99LU0 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Chmp1b1Q99LU0 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp1b1Q99LU0 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp1b1Q99LU0 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp1b1Q99LU0 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp1b1Q99LU0 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC13.87□□□□□ -0.19
Chmp1b1Q99LU0 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp1b1Q99LU0 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp1b1Q99LU0 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
Chmp1b1Q99LU0 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp1b1Q99LU0 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp1b1Q99LU0 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp1b1Q99LU0 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp1b1Q99LU0 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp1b1Q99LU0 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp1b1Q99LU0 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp1b1Q99LU0 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp1b1Q99LU0 Gm5364-201ENSMUST00000216789 889 ntBASIC13.87□□□□□ -0.19
Chmp1b1Q99LU0 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp1b1Q99LU0 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp1b1Q99LU0 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp1b1Q99LU0 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp1b1Q99LU0 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Chmp1b1Q99LU0 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp1b1Q99LU0 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp1b1Q99LU0 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
Chmp1b1Q99LU0 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp1b1Q99LU0 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Chmp1b1Q99LU0 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp1b1Q99LU0 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp1b1Q99LU0 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
Chmp1b1Q99LU0 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp1b1Q99LU0 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Chmp1b1Q99LU0 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp1b1Q99LU0 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp1b1Q99LU0 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp1b1Q99LU0 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp1b1Q99LU0 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Chmp1b1Q99LU0 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp1b1Q99LU0 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp1b1Q99LU0 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Chmp1b1Q99LU0 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Chmp1b1Q99LU0 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Chmp1b1Q99LU0 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
Chmp1b1Q99LU0 Gm45760-201ENSMUST00000212190 1782 ntBASIC13.86□□□□□ -0.19
Chmp1b1Q99LU0 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
Chmp1b1Q99LU0 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Chmp1b1Q99LU0 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC13.86□□□□□ -0.19
Chmp1b1Q99LU0 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Chmp1b1Q99LU0 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Chmp1b1Q99LU0 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Chmp1b1Q99LU0 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Chmp1b1Q99LU0 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Chmp1b1Q99LU0 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Chmp1b1Q99LU0 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Chmp1b1Q99LU0 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Chmp1b1Q99LU0 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC13.86□□□□□ -0.19
Chmp1b1Q99LU0 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC13.86□□□□□ -0.19
Chmp1b1Q99LU0 CT010506.4-201ENSMUST00000225457 351 ntBASIC13.86□□□□□ -0.19
Chmp1b1Q99LU0 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC13.86□□□□□ -0.19
Chmp1b1Q99LU0 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Chmp1b1Q99LU0 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Chmp1b1Q99LU0 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Chmp1b1Q99LU0 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Chmp1b1Q99LU0 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Chmp1b1Q99LU0 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Chmp1b1Q99LU0 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
Chmp1b1Q99LU0 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Chmp1b1Q99LU0 Gm11873-201ENSMUST00000117877 1304 ntBASIC13.86□□□□□ -0.19
Chmp1b1Q99LU0 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Chmp1b1Q99LU0 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Chmp1b1Q99LU0 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Chmp1b1Q99LU0 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Chmp1b1Q99LU0 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Chmp1b1Q99LU0 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Chmp1b1Q99LU0 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Chmp1b1Q99LU0 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms