Protein–RNA interactions for Protein: Q99KL7

Rab28, Ras-related protein Rab-28, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab28Q99KL7 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rab28Q99KL7 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Rab28Q99KL7 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rab28Q99KL7 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Rab28Q99KL7 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rab28Q99KL7 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rab28Q99KL7 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Rab28Q99KL7 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rab28Q99KL7 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC14.16□□□□□ -0.14
Rab28Q99KL7 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC14.16□□□□□ -0.14
Rab28Q99KL7 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Rab28Q99KL7 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rab28Q99KL7 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC14.16□□□□□ -0.14
Rab28Q99KL7 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rab28Q99KL7 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rab28Q99KL7 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Rab28Q99KL7 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Rab28Q99KL7 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rab28Q99KL7 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC14.16□□□□□ -0.14
Rab28Q99KL7 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rab28Q99KL7 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rab28Q99KL7 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rab28Q99KL7 Gm16425-201ENSMUST00000118143 3130 ntBASIC14.16□□□□□ -0.14
Rab28Q99KL7 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rab28Q99KL7 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rab28Q99KL7 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rab28Q99KL7 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rab28Q99KL7 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rab28Q99KL7 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Rab28Q99KL7 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rab28Q99KL7 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rab28Q99KL7 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rab28Q99KL7 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC14.15□□□□□ -0.14
Rab28Q99KL7 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC14.15□□□□□ -0.14
Rab28Q99KL7 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.15□□□□□ -0.14
Rab28Q99KL7 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC14.15□□□□□ -0.14
Rab28Q99KL7 Gm6756-201ENSMUST00000180647 1620 ntBASIC14.15□□□□□ -0.14
Rab28Q99KL7 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rab28Q99KL7 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rab28Q99KL7 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.15□□□□□ -0.14
Rab28Q99KL7 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rab28Q99KL7 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rab28Q99KL7 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rab28Q99KL7 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rab28Q99KL7 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Rab28Q99KL7 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Rab28Q99KL7 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rab28Q99KL7 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rab28Q99KL7 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rab28Q99KL7 Gm24158-201ENSMUST00000175263 71 ntBASIC14.15□□□□□ -0.14
Rab28Q99KL7 Gm9824-201ENSMUST00000178707 561 ntBASIC14.15□□□□□ -0.14
Rab28Q99KL7 Ighv8-7-201ENSMUST00000194349 297 ntBASIC14.15□□□□□ -0.14
Rab28Q99KL7 Gm37230-201ENSMUST00000194491 818 ntBASIC14.15□□□□□ -0.14
Rab28Q99KL7 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC14.15□□□□□ -0.14
Rab28Q99KL7 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rab28Q99KL7 AC140397.2-201ENSMUST00000224213 834 ntBASIC14.15□□□□□ -0.14
Rab28Q99KL7 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rab28Q99KL7 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.15□□□□□ -0.14
Rab28Q99KL7 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rab28Q99KL7 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.15□□□□□ -0.14
Rab28Q99KL7 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rab28Q99KL7 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rab28Q99KL7 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rab28Q99KL7 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rab28Q99KL7 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rab28Q99KL7 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rab28Q99KL7 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rab28Q99KL7 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC14.15□□□□□ -0.15
Rab28Q99KL7 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Rab28Q99KL7 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Rab28Q99KL7 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rab28Q99KL7 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Rab28Q99KL7 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rab28Q99KL7 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rab28Q99KL7 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rab28Q99KL7 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rab28Q99KL7 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rab28Q99KL7 Carlr-201ENSMUST00000181515 2574 ntBASIC14.14□□□□□ -0.15
Rab28Q99KL7 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rab28Q99KL7 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rab28Q99KL7 Gm8116-201ENSMUST00000182917 1201 ntBASIC14.14□□□□□ -0.15
Rab28Q99KL7 Gm10253-201ENSMUST00000194270 940 ntBASIC14.14□□□□□ -0.15
Rab28Q99KL7 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC14.14□□□□□ -0.15
Rab28Q99KL7 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC14.14□□□□□ -0.15
Rab28Q99KL7 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
Rab28Q99KL7 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rab28Q99KL7 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC14.14□□□□□ -0.15
Rab28Q99KL7 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Rab28Q99KL7 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Rab28Q99KL7 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rab28Q99KL7 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rab28Q99KL7 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rab28Q99KL7 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rab28Q99KL7 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rab28Q99KL7 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rab28Q99KL7 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rab28Q99KL7 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Rab28Q99KL7 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC14.14□□□□□ -0.15
Rab28Q99KL7 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rab28Q99KL7 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms