Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
Thumpd1Q99J36 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
Thumpd1Q99J36 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Thumpd1Q99J36 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Thumpd1Q99J36 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Thumpd1Q99J36 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Thumpd1Q99J36 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Thumpd1Q99J36 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Thumpd1Q99J36 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC13.09□□□□□ -0.31
Thumpd1Q99J36 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Thumpd1Q99J36 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Thumpd1Q99J36 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
Thumpd1Q99J36 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Thumpd1Q99J36 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Thumpd1Q99J36 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Thumpd1Q99J36 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Thumpd1Q99J36 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC13.09□□□□□ -0.31
Thumpd1Q99J36 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Thumpd1Q99J36 Gm5184-201ENSMUST00000220417 1702 ntBASIC13.08□□□□□ -0.32
Thumpd1Q99J36 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Thumpd1Q99J36 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Thumpd1Q99J36 CT030684.3-201ENSMUST00000227308 2445 ntBASIC13.08□□□□□ -0.32
Thumpd1Q99J36 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Thumpd1Q99J36 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
Thumpd1Q99J36 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Thumpd1Q99J36 AC126250.1-201ENSMUST00000228343 1768 ntBASIC13.08□□□□□ -0.32
Thumpd1Q99J36 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Thumpd1Q99J36 Gm11185-201ENSMUST00000117732 1007 ntBASIC13.08□□□□□ -0.32
Thumpd1Q99J36 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Thumpd1Q99J36 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC13.08□□□□□ -0.32
Thumpd1Q99J36 Gm6659-201ENSMUST00000174752 547 ntBASIC13.08□□□□□ -0.32
Thumpd1Q99J36 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Thumpd1Q99J36 AC121577.1-201ENSMUST00000227302 707 ntBASIC13.08□□□□□ -0.32
Thumpd1Q99J36 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Thumpd1Q99J36 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Thumpd1Q99J36 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Thumpd1Q99J36 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Thumpd1Q99J36 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Thumpd1Q99J36 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Thumpd1Q99J36 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Thumpd1Q99J36 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC13.08□□□□□ -0.32
Thumpd1Q99J36 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Thumpd1Q99J36 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Thumpd1Q99J36 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Thumpd1Q99J36 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Thumpd1Q99J36 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Thumpd1Q99J36 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Thumpd1Q99J36 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Thumpd1Q99J36 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Thumpd1Q99J36 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Thumpd1Q99J36 Gm28182-201ENSMUST00000188354 2477 ntBASIC13.07□□□□□ -0.32
Thumpd1Q99J36 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Thumpd1Q99J36 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Thumpd1Q99J36 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.07□□□□□ -0.32
Thumpd1Q99J36 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC13.07□□□□□ -0.32
Thumpd1Q99J36 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC13.07□□□□□ -0.32
Thumpd1Q99J36 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Thumpd1Q99J36 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Thumpd1Q99J36 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
Thumpd1Q99J36 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Thumpd1Q99J36 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Thumpd1Q99J36 Gm4081-201ENSMUST00000195287 1838 ntBASIC13.07□□□□□ -0.32
Thumpd1Q99J36 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Thumpd1Q99J36 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
Thumpd1Q99J36 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Thumpd1Q99J36 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Thumpd1Q99J36 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Thumpd1Q99J36 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Thumpd1Q99J36 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Thumpd1Q99J36 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Thumpd1Q99J36 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Thumpd1Q99J36 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Thumpd1Q99J36 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC13.07□□□□□ -0.32
Thumpd1Q99J36 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Thumpd1Q99J36 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Thumpd1Q99J36 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Thumpd1Q99J36 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Thumpd1Q99J36 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC13.07□□□□□ -0.32
Thumpd1Q99J36 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Thumpd1Q99J36 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Thumpd1Q99J36 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Thumpd1Q99J36 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.07□□□□□ -0.32
Thumpd1Q99J36 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Thumpd1Q99J36 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
Thumpd1Q99J36 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Thumpd1Q99J36 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Thumpd1Q99J36 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Thumpd1Q99J36 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC13.07□□□□□ -0.32
Thumpd1Q99J36 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
Thumpd1Q99J36 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Thumpd1Q99J36 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Thumpd1Q99J36 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Thumpd1Q99J36 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Thumpd1Q99J36 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13.06□□□□□ -0.32
Thumpd1Q99J36 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC13.06□□□□□ -0.32
Thumpd1Q99J36 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Thumpd1Q99J36 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Thumpd1Q99J36 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Thumpd1Q99J36 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Thumpd1Q99J36 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms