Protein–RNA interactions for Protein: Q921W0

Chmp1a, Charged multivesicular body protein 1a, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1aQ921W0 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chmp1aQ921W0 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Chmp1aQ921W0 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Chmp1aQ921W0 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC12.96□□□□□ -0.33
Chmp1aQ921W0 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Chmp1aQ921W0 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Chmp1aQ921W0 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.96□□□□□ -0.33
Chmp1aQ921W0 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Chmp1aQ921W0 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Chmp1aQ921W0 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Chmp1aQ921W0 Gm15358-201ENSMUST00000119249 520 ntBASIC12.96□□□□□ -0.33
Chmp1aQ921W0 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC12.96□□□□□ -0.33
Chmp1aQ921W0 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC12.96□□□□□ -0.33
Chmp1aQ921W0 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Chmp1aQ921W0 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC12.96□□□□□ -0.33
Chmp1aQ921W0 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Chmp1aQ921W0 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
Chmp1aQ921W0 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC12.96□□□□□ -0.33
Chmp1aQ921W0 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Chmp1aQ921W0 AC093926.2-201ENSMUST00000214468 1228 ntBASIC12.96□□□□□ -0.33
Chmp1aQ921W0 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Chmp1aQ921W0 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Chmp1aQ921W0 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Chmp1aQ921W0 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Chmp1aQ921W0 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Chmp1aQ921W0 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Chmp1aQ921W0 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Chmp1aQ921W0 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Chmp1aQ921W0 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Chmp1aQ921W0 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Chmp1aQ921W0 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Chmp1aQ921W0 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Chmp1aQ921W0 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Chmp1aQ921W0 Gm44981-201ENSMUST00000205549 1943 ntBASIC12.96□□□□□ -0.34
Chmp1aQ921W0 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
Chmp1aQ921W0 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chmp1aQ921W0 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC12.95□□□□□ -0.34
Chmp1aQ921W0 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Chmp1aQ921W0 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chmp1aQ921W0 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chmp1aQ921W0 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chmp1aQ921W0 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chmp1aQ921W0 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chmp1aQ921W0 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chmp1aQ921W0 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chmp1aQ921W0 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chmp1aQ921W0 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Chmp1aQ921W0 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Chmp1aQ921W0 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chmp1aQ921W0 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC12.95□□□□□ -0.34
Chmp1aQ921W0 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC12.95□□□□□ -0.34
Chmp1aQ921W0 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC12.95□□□□□ -0.34
Chmp1aQ921W0 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC12.95□□□□□ -0.34
Chmp1aQ921W0 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Chmp1aQ921W0 Gm7506-201ENSMUST00000207758 815 ntBASIC12.95□□□□□ -0.34
Chmp1aQ921W0 Gm8655-201ENSMUST00000221159 852 ntBASIC12.95□□□□□ -0.34
Chmp1aQ921W0 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Chmp1aQ921W0 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Chmp1aQ921W0 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chmp1aQ921W0 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chmp1aQ921W0 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Chmp1aQ921W0 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chmp1aQ921W0 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chmp1aQ921W0 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Chmp1aQ921W0 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chmp1aQ921W0 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chmp1aQ921W0 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chmp1aQ921W0 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chmp1aQ921W0 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Chmp1aQ921W0 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chmp1aQ921W0 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chmp1aQ921W0 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Chmp1aQ921W0 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Chmp1aQ921W0 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC12.94□□□□□ -0.34
Chmp1aQ921W0 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Chmp1aQ921W0 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Chmp1aQ921W0 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.94□□□□□ -0.34
Chmp1aQ921W0 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Chmp1aQ921W0 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Chmp1aQ921W0 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Chmp1aQ921W0 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Chmp1aQ921W0 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Chmp1aQ921W0 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC12.94□□□□□ -0.34
Chmp1aQ921W0 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
Chmp1aQ921W0 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC12.94□□□□□ -0.34
Chmp1aQ921W0 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Chmp1aQ921W0 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Chmp1aQ921W0 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC12.94□□□□□ -0.34
Chmp1aQ921W0 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC12.94□□□□□ -0.34
Chmp1aQ921W0 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC12.94□□□□□ -0.34
Chmp1aQ921W0 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Chmp1aQ921W0 Gm27867-201ENSMUST00000184778 125 ntBASIC12.94□□□□□ -0.34
Chmp1aQ921W0 Gm43767-201ENSMUST00000198933 381 ntBASIC12.94□□□□□ -0.34
Chmp1aQ921W0 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Chmp1aQ921W0 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC12.94□□□□□ -0.34
Chmp1aQ921W0 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC12.94□□□□□ -0.34
Chmp1aQ921W0 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC12.94□□□□□ -0.34
Chmp1aQ921W0 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Chmp1aQ921W0 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Chmp1aQ921W0 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms