Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdha3Q91Y16 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdha3Q91Y16 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Pcdha3Q91Y16 Nrn1-204ENSMUST00000224323 1779 ntBASIC15.34■□□□□ 0.05
Pcdha3Q91Y16 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdha3Q91Y16 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdha3Q91Y16 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdha3Q91Y16 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdha3Q91Y16 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Pcdha3Q91Y16 AC162938.1-201ENSMUST00000213140 2323 ntBASIC15.33■□□□□ 0.05
Pcdha3Q91Y16 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdha3Q91Y16 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdha3Q91Y16 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdha3Q91Y16 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC15.33■□□□□ 0.04
Pcdha3Q91Y16 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdha3Q91Y16 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdha3Q91Y16 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdha3Q91Y16 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC15.33■□□□□ 0.04
Pcdha3Q91Y16 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Pcdha3Q91Y16 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Pcdha3Q91Y16 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC15.33■□□□□ 0.04
Pcdha3Q91Y16 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdha3Q91Y16 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Pcdha3Q91Y16 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC15.33■□□□□ 0.04
Pcdha3Q91Y16 AC124549.3-201ENSMUST00000225541 367 ntBASIC15.33■□□□□ 0.04
Pcdha3Q91Y16 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdha3Q91Y16 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdha3Q91Y16 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Pcdha3Q91Y16 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC15.33■□□□□ 0.04
Pcdha3Q91Y16 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdha3Q91Y16 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdha3Q91Y16 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdha3Q91Y16 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdha3Q91Y16 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdha3Q91Y16 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdha3Q91Y16 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Pcdha3Q91Y16 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
Pcdha3Q91Y16 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdha3Q91Y16 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdha3Q91Y16 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
Pcdha3Q91Y16 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdha3Q91Y16 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC15.32■□□□□ 0.04
Pcdha3Q91Y16 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdha3Q91Y16 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdha3Q91Y16 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdha3Q91Y16 Gm16026-204ENSMUST00000162652 683 ntBASIC15.32■□□□□ 0.04
Pcdha3Q91Y16 Rpph1-201ENSMUST00000175096 319 ntBASIC15.32■□□□□ 0.04
Pcdha3Q91Y16 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC15.32■□□□□ 0.04
Pcdha3Q91Y16 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC15.32■□□□□ 0.04
Pcdha3Q91Y16 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdha3Q91Y16 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Pcdha3Q91Y16 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC15.32■□□□□ 0.04
Pcdha3Q91Y16 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Pcdha3Q91Y16 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdha3Q91Y16 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdha3Q91Y16 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Pcdha3Q91Y16 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdha3Q91Y16 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdha3Q91Y16 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdha3Q91Y16 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdha3Q91Y16 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdha3Q91Y16 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdha3Q91Y16 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdha3Q91Y16 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdha3Q91Y16 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdha3Q91Y16 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Pcdha3Q91Y16 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdha3Q91Y16 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdha3Q91Y16 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdha3Q91Y16 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdha3Q91Y16 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdha3Q91Y16 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdha3Q91Y16 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdha3Q91Y16 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdha3Q91Y16 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdha3Q91Y16 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC15.31■□□□□ 0.04
Pcdha3Q91Y16 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC15.31■□□□□ 0.04
Pcdha3Q91Y16 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC15.31■□□□□ 0.04
Pcdha3Q91Y16 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC15.31■□□□□ 0.04
Pcdha3Q91Y16 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Pcdha3Q91Y16 Gm43575-201ENSMUST00000196420 516 ntBASIC15.31■□□□□ 0.04
Pcdha3Q91Y16 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdha3Q91Y16 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC15.31■□□□□ 0.04
Pcdha3Q91Y16 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdha3Q91Y16 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdha3Q91Y16 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdha3Q91Y16 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdha3Q91Y16 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Pcdha3Q91Y16 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC15.31■□□□□ 0.04
Pcdha3Q91Y16 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdha3Q91Y16 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdha3Q91Y16 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdha3Q91Y16 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdha3Q91Y16 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdha3Q91Y16 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdha3Q91Y16 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdha3Q91Y16 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Pcdha3Q91Y16 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Pcdha3Q91Y16 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Pcdha3Q91Y16 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms