Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
Pcdha9Q91Y11 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Pcdha9Q91Y11 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Pcdha9Q91Y11 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Pcdha9Q91Y11 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdha9Q91Y11 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdha9Q91Y11 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdha9Q91Y11 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdha9Q91Y11 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdha9Q91Y11 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdha9Q91Y11 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdha9Q91Y11 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdha9Q91Y11 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdha9Q91Y11 Gm38225-201ENSMUST00000194001 393 ntBASIC15.58■□□□□ 0.08
Pcdha9Q91Y11 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdha9Q91Y11 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC15.58■□□□□ 0.08
Pcdha9Q91Y11 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC15.58■□□□□ 0.08
Pcdha9Q91Y11 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Pcdha9Q91Y11 Chchd1-203ENSMUST00000224633 557 ntBASIC15.58■□□□□ 0.08
Pcdha9Q91Y11 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdha9Q91Y11 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdha9Q91Y11 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdha9Q91Y11 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdha9Q91Y11 Gm6018-201ENSMUST00000216090 1306 ntBASIC15.58■□□□□ 0.08
Pcdha9Q91Y11 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdha9Q91Y11 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC15.58■□□□□ 0.08
Pcdha9Q91Y11 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdha9Q91Y11 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Pcdha9Q91Y11 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdha9Q91Y11 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC15.57■□□□□ 0.08
Pcdha9Q91Y11 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdha9Q91Y11 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Pcdha9Q91Y11 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Pcdha9Q91Y11 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdha9Q91Y11 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdha9Q91Y11 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdha9Q91Y11 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdha9Q91Y11 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdha9Q91Y11 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Pcdha9Q91Y11 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC15.57■□□□□ 0.08
Pcdha9Q91Y11 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdha9Q91Y11 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC15.57■□□□□ 0.08
Pcdha9Q91Y11 Mir6990-201ENSMUST00000183724 91 ntBASIC15.57■□□□□ 0.08
Pcdha9Q91Y11 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
Pcdha9Q91Y11 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdha9Q91Y11 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdha9Q91Y11 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdha9Q91Y11 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdha9Q91Y11 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Pcdha9Q91Y11 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
Pcdha9Q91Y11 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Pcdha9Q91Y11 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdha9Q91Y11 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC15.56■□□□□ 0.08
Pcdha9Q91Y11 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdha9Q91Y11 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdha9Q91Y11 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdha9Q91Y11 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
Pcdha9Q91Y11 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdha9Q91Y11 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Pcdha9Q91Y11 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdha9Q91Y11 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdha9Q91Y11 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdha9Q91Y11 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC15.56■□□□□ 0.08
Pcdha9Q91Y11 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Pcdha9Q91Y11 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdha9Q91Y11 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdha9Q91Y11 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdha9Q91Y11 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdha9Q91Y11 Gm23547-201ENSMUST00000158210 271 ntBASIC15.56■□□□□ 0.08
Pcdha9Q91Y11 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC15.56■□□□□ 0.08
Pcdha9Q91Y11 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC15.56■□□□□ 0.08
Pcdha9Q91Y11 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdha9Q91Y11 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdha9Q91Y11 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdha9Q91Y11 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdha9Q91Y11 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC15.56■□□□□ 0.08
Pcdha9Q91Y11 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdha9Q91Y11 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdha9Q91Y11 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdha9Q91Y11 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdha9Q91Y11 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdha9Q91Y11 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdha9Q91Y11 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdha9Q91Y11 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdha9Q91Y11 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Pcdha9Q91Y11 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdha9Q91Y11 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Pcdha9Q91Y11 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdha9Q91Y11 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdha9Q91Y11 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdha9Q91Y11 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdha9Q91Y11 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdha9Q91Y11 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdha9Q91Y11 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdha9Q91Y11 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdha9Q91Y11 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdha9Q91Y11 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdha9Q91Y11 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdha9Q91Y11 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC15.55■□□□□ 0.08
Pcdha9Q91Y11 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms