Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb1Q91Y08 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb1Q91Y08 Gm15427-201ENSMUST00000117288 531 ntBASIC15.24■□□□□ 0.03
Pcdhb1Q91Y08 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC15.24■□□□□ 0.03
Pcdhb1Q91Y08 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb1Q91Y08 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb1Q91Y08 Rpph1-201ENSMUST00000175096 319 ntBASIC15.24■□□□□ 0.03
Pcdhb1Q91Y08 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC15.24■□□□□ 0.03
Pcdhb1Q91Y08 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC15.24■□□□□ 0.03
Pcdhb1Q91Y08 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb1Q91Y08 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC15.24■□□□□ 0.03
Pcdhb1Q91Y08 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Pcdhb1Q91Y08 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb1Q91Y08 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Pcdhb1Q91Y08 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb1Q91Y08 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb1Q91Y08 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb1Q91Y08 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC15.24■□□□□ 0.03
Pcdhb1Q91Y08 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb1Q91Y08 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb1Q91Y08 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb1Q91Y08 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Pcdhb1Q91Y08 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb1Q91Y08 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Pcdhb1Q91Y08 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb1Q91Y08 Gm45760-201ENSMUST00000212190 1782 ntBASIC15.24■□□□□ 0.03
Pcdhb1Q91Y08 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb1Q91Y08 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb1Q91Y08 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
Pcdhb1Q91Y08 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb1Q91Y08 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb1Q91Y08 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb1Q91Y08 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC15.23■□□□□ 0.03
Pcdhb1Q91Y08 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb1Q91Y08 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb1Q91Y08 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb1Q91Y08 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Pcdhb1Q91Y08 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb1Q91Y08 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb1Q91Y08 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb1Q91Y08 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC15.23■□□□□ 0.03
Pcdhb1Q91Y08 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Pcdhb1Q91Y08 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Pcdhb1Q91Y08 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC15.23■□□□□ 0.03
Pcdhb1Q91Y08 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Pcdhb1Q91Y08 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
Pcdhb1Q91Y08 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
Pcdhb1Q91Y08 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC15.23■□□□□ 0.03
Pcdhb1Q91Y08 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb1Q91Y08 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb1Q91Y08 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb1Q91Y08 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb1Q91Y08 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC15.23■□□□□ 0.03
Pcdhb1Q91Y08 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb1Q91Y08 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb1Q91Y08 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Pcdhb1Q91Y08 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Pcdhb1Q91Y08 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb1Q91Y08 Gm10676-201ENSMUST00000098778 3221 ntBASIC15.22■□□□□ 0.03
Pcdhb1Q91Y08 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb1Q91Y08 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb1Q91Y08 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb1Q91Y08 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb1Q91Y08 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb1Q91Y08 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb1Q91Y08 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb1Q91Y08 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC15.22■□□□□ 0.03
Pcdhb1Q91Y08 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb1Q91Y08 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb1Q91Y08 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb1Q91Y08 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
Pcdhb1Q91Y08 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC15.22■□□□□ 0.03
Pcdhb1Q91Y08 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb1Q91Y08 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb1Q91Y08 Gm11779-201ENSMUST00000118541 368 ntBASIC15.22■□□□□ 0.03
Pcdhb1Q91Y08 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC15.22■□□□□ 0.03
Pcdhb1Q91Y08 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC15.22■□□□□ 0.03
Pcdhb1Q91Y08 Gm9182-201ENSMUST00000217829 639 ntBASIC15.22■□□□□ 0.03
Pcdhb1Q91Y08 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb1Q91Y08 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb1Q91Y08 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb1Q91Y08 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb1Q91Y08 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb1Q91Y08 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb1Q91Y08 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb1Q91Y08 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb1Q91Y08 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Pcdhb1Q91Y08 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb1Q91Y08 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC15.22■□□□□ 0.03
Pcdhb1Q91Y08 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb1Q91Y08 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb1Q91Y08 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
Pcdhb1Q91Y08 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Pcdhb1Q91Y08 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC15.22■□□□□ 0.03
Pcdhb1Q91Y08 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb1Q91Y08 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
Pcdhb1Q91Y08 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb1Q91Y08 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Pcdhb1Q91Y08 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb1Q91Y08 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms