Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Pcdhb20Q91XZ9 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb20Q91XZ9 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.35□□□□□ -0.11
Pcdhb20Q91XZ9 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb20Q91XZ9 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.35□□□□□ -0.11
Pcdhb20Q91XZ9 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb20Q91XZ9 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb20Q91XZ9 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb20Q91XZ9 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Pcdhb20Q91XZ9 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC14.35□□□□□ -0.11
Pcdhb20Q91XZ9 Vmn1r23-201ENSMUST00000175817 997 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Pcdhb20Q91XZ9 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC14.35□□□□□ -0.11
Pcdhb20Q91XZ9 4921511E07Rik-201ENSMUST00000194790 827 ntBASIC14.35□□□□□ -0.11
Pcdhb20Q91XZ9 Gm43263-201ENSMUST00000201619 560 ntTSL 5 BASIC14.35□□□□□ -0.11
Pcdhb20Q91XZ9 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC14.35□□□□□ -0.11
Pcdhb20Q91XZ9 CT025555.1-201ENSMUST00000225901 1217 ntBASIC14.35□□□□□ -0.11
Pcdhb20Q91XZ9 Ermard-209ENSMUST00000226561 1019 ntBASIC14.35□□□□□ -0.11
Pcdhb20Q91XZ9 AC155252.2-201ENSMUST00000226946 680 ntBASIC14.35□□□□□ -0.11
Pcdhb20Q91XZ9 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb20Q91XZ9 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb20Q91XZ9 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb20Q91XZ9 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Pcdhb20Q91XZ9 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb20Q91XZ9 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb20Q91XZ9 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb20Q91XZ9 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb20Q91XZ9 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb20Q91XZ9 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb20Q91XZ9 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb20Q91XZ9 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb20Q91XZ9 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb20Q91XZ9 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb20Q91XZ9 Gm8096-201ENSMUST00000209921 1591 ntBASIC14.34□□□□□ -0.11
Pcdhb20Q91XZ9 Vrk1-204ENSMUST00000220629 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb20Q91XZ9 AC126250.1-201ENSMUST00000228343 1768 ntBASIC14.34□□□□□ -0.11
Pcdhb20Q91XZ9 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb20Q91XZ9 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC14.34□□□□□ -0.11
Pcdhb20Q91XZ9 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb20Q91XZ9 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Pcdhb20Q91XZ9 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC14.34□□□□□ -0.11
Pcdhb20Q91XZ9 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb20Q91XZ9 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb20Q91XZ9 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb20Q91XZ9 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb20Q91XZ9 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Pcdhb20Q91XZ9 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
Pcdhb20Q91XZ9 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC14.34□□□□□ -0.11
Pcdhb20Q91XZ9 Gm15937-201ENSMUST00000120727 1235 ntBASIC14.34□□□□□ -0.11
Pcdhb20Q91XZ9 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Pcdhb20Q91XZ9 4930551O13Rik-201ENSMUST00000145585 1065 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb20Q91XZ9 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb20Q91XZ9 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb20Q91XZ9 Rprl2-201ENSMUST00000157150 290 ntBASIC14.34□□□□□ -0.11
Pcdhb20Q91XZ9 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb20Q91XZ9 Gm28721-201ENSMUST00000187649 918 ntTSL 3 BASIC14.34□□□□□ -0.11
Pcdhb20Q91XZ9 9430037O13Rik-201ENSMUST00000192556 1008 ntBASIC14.34□□□□□ -0.11
Pcdhb20Q91XZ9 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb20Q91XZ9 AC164567.1-201ENSMUST00000219185 960 ntBASIC14.34□□□□□ -0.11
Pcdhb20Q91XZ9 Msmb-201ENSMUST00000022464 562 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb20Q91XZ9 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb20Q91XZ9 Pate4-201ENSMUST00000034610 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb20Q91XZ9 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb20Q91XZ9 Olfr684-201ENSMUST00000060893 939 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Pcdhb20Q91XZ9 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb20Q91XZ9 Spink11-201ENSMUST00000097587 746 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb20Q91XZ9 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
Pcdhb20Q91XZ9 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb20Q91XZ9 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC14.34□□□□□ -0.11
Pcdhb20Q91XZ9 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb20Q91XZ9 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC14.34□□□□□ -0.11
Pcdhb20Q91XZ9 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb20Q91XZ9 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb20Q91XZ9 AC154186.1-201ENSMUST00000227711 1597 ntBASIC14.34□□□□□ -0.11
Pcdhb20Q91XZ9 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Pcdhb20Q91XZ9 Sybu-209ENSMUST00000228639 4113 ntBASIC14.34□□□□□ -0.11
Pcdhb20Q91XZ9 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb20Q91XZ9 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pcdhb20Q91XZ9 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pcdhb20Q91XZ9 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC14.33□□□□□ -0.11
Pcdhb20Q91XZ9 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pcdhb20Q91XZ9 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pcdhb20Q91XZ9 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhb20Q91XZ9 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhb20Q91XZ9 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhb20Q91XZ9 Gm16011-201ENSMUST00000121567 2662 ntBASIC14.33□□□□□ -0.12
Pcdhb20Q91XZ9 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhb20Q91XZ9 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhb20Q91XZ9 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhb20Q91XZ9 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Pcdhb20Q91XZ9 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhb20Q91XZ9 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.33□□□□□ -0.12
Pcdhb20Q91XZ9 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhb20Q91XZ9 Mir706-201ENSMUST00000102262 84 ntBASIC14.33□□□□□ -0.12
Pcdhb20Q91XZ9 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Pcdhb20Q91XZ9 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Pcdhb20Q91XZ9 Smgc-203ENSMUST00000109276 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhb20Q91XZ9 Mir1192-201ENSMUST00000116976 121 ntBASIC14.33□□□□□ -0.12
Pcdhb20Q91XZ9 Gm13313-201ENSMUST00000118938 1084 ntBASIC14.33□□□□□ -0.12
Pcdhb20Q91XZ9 Gm12088-201ENSMUST00000137364 520 ntTSL 2 BASIC14.33□□□□□ -0.12
Pcdhb20Q91XZ9 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms