Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdhb3Q91XZ7 Gm7669-201ENSMUST00000210184 1603 ntBASIC14.71□□□□□ -0.05
Pcdhb3Q91XZ7 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
Pcdhb3Q91XZ7 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdhb3Q91XZ7 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdhb3Q91XZ7 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
Pcdhb3Q91XZ7 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdhb3Q91XZ7 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdhb3Q91XZ7 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC14.71□□□□□ -0.05
Pcdhb3Q91XZ7 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdhb3Q91XZ7 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdhb3Q91XZ7 Rps4l-201ENSMUST00000071745 943 ntBASIC14.71□□□□□ -0.05
Pcdhb3Q91XZ7 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Pcdhb3Q91XZ7 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdhb3Q91XZ7 Mypopos-202ENSMUST00000205975 2321 ntBASIC14.71□□□□□ -0.05
Pcdhb3Q91XZ7 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC14.71□□□□□ -0.06
Pcdhb3Q91XZ7 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Pcdhb3Q91XZ7 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Pcdhb3Q91XZ7 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb3Q91XZ7 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC14.7□□□□□ -0.06
Pcdhb3Q91XZ7 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb3Q91XZ7 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb3Q91XZ7 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb3Q91XZ7 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
Pcdhb3Q91XZ7 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb3Q91XZ7 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb3Q91XZ7 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Pcdhb3Q91XZ7 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb3Q91XZ7 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb3Q91XZ7 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC14.7□□□□□ -0.06
Pcdhb3Q91XZ7 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC14.7□□□□□ -0.06
Pcdhb3Q91XZ7 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Pcdhb3Q91XZ7 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC14.7□□□□□ -0.06
Pcdhb3Q91XZ7 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC14.7□□□□□ -0.06
Pcdhb3Q91XZ7 Gm18195-201ENSMUST00000207604 706 ntBASIC14.7□□□□□ -0.06
Pcdhb3Q91XZ7 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC14.7□□□□□ -0.06
Pcdhb3Q91XZ7 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC14.7□□□□□ -0.06
Pcdhb3Q91XZ7 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC14.7□□□□□ -0.06
Pcdhb3Q91XZ7 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb3Q91XZ7 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb3Q91XZ7 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC14.7□□□□□ -0.06
Pcdhb3Q91XZ7 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Pcdhb3Q91XZ7 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb3Q91XZ7 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC14.7□□□□□ -0.06
Pcdhb3Q91XZ7 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb3Q91XZ7 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb3Q91XZ7 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb3Q91XZ7 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb3Q91XZ7 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb3Q91XZ7 Gm38346-201ENSMUST00000192379 2639 ntBASIC14.7□□□□□ -0.06
Pcdhb3Q91XZ7 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb3Q91XZ7 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb3Q91XZ7 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Pcdhb3Q91XZ7 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb3Q91XZ7 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb3Q91XZ7 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb3Q91XZ7 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb3Q91XZ7 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb3Q91XZ7 Gm26540-201ENSMUST00000181858 1310 ntTSL 5 BASIC14.69□□□□□ -0.06
Pcdhb3Q91XZ7 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb3Q91XZ7 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Pcdhb3Q91XZ7 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb3Q91XZ7 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb3Q91XZ7 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb3Q91XZ7 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb3Q91XZ7 Gm44645-201ENSMUST00000205492 1653 ntBASIC14.69□□□□□ -0.06
Pcdhb3Q91XZ7 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb3Q91XZ7 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb3Q91XZ7 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb3Q91XZ7 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb3Q91XZ7 Gm20618-202ENSMUST00000177482 1227 ntTSL 3 BASIC14.69□□□□□ -0.06
Pcdhb3Q91XZ7 Gm27867-201ENSMUST00000184778 125 ntBASIC14.69□□□□□ -0.06
Pcdhb3Q91XZ7 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb3Q91XZ7 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb3Q91XZ7 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb3Q91XZ7 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Pcdhb3Q91XZ7 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb3Q91XZ7 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb3Q91XZ7 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Pcdhb3Q91XZ7 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb3Q91XZ7 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC14.69□□□□□ -0.06
Pcdhb3Q91XZ7 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb3Q91XZ7 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb3Q91XZ7 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb3Q91XZ7 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Pcdhb3Q91XZ7 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
Pcdhb3Q91XZ7 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
Pcdhb3Q91XZ7 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb3Q91XZ7 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb3Q91XZ7 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb3Q91XZ7 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb3Q91XZ7 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Pcdhb3Q91XZ7 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb3Q91XZ7 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb3Q91XZ7 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC14.68□□□□□ -0.06
Pcdhb3Q91XZ7 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC14.68□□□□□ -0.06
Pcdhb3Q91XZ7 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
Pcdhb3Q91XZ7 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Pcdhb3Q91XZ7 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb3Q91XZ7 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms