Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Pcdhb4Q91XZ6 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb4Q91XZ6 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC14.6□□□□□ -0.07
Pcdhb4Q91XZ6 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC14.6□□□□□ -0.07
Pcdhb4Q91XZ6 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC14.6□□□□□ -0.07
Pcdhb4Q91XZ6 Gm43935-201ENSMUST00000203569 1050 ntBASIC14.6□□□□□ -0.07
Pcdhb4Q91XZ6 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Pcdhb4Q91XZ6 AC164567.1-201ENSMUST00000219185 960 ntBASIC14.6□□□□□ -0.07
Pcdhb4Q91XZ6 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb4Q91XZ6 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb4Q91XZ6 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb4Q91XZ6 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb4Q91XZ6 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb4Q91XZ6 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
Pcdhb4Q91XZ6 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb4Q91XZ6 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb4Q91XZ6 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb4Q91XZ6 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb4Q91XZ6 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb4Q91XZ6 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb4Q91XZ6 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
Pcdhb4Q91XZ6 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb4Q91XZ6 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb4Q91XZ6 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb4Q91XZ6 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb4Q91XZ6 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb4Q91XZ6 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb4Q91XZ6 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb4Q91XZ6 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb4Q91XZ6 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb4Q91XZ6 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC14.59□□□□□ -0.07
Pcdhb4Q91XZ6 Gm6184-201ENSMUST00000120403 1261 ntBASIC14.59□□□□□ -0.07
Pcdhb4Q91XZ6 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb4Q91XZ6 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb4Q91XZ6 Gm18246-201ENSMUST00000221023 728 ntBASIC14.59□□□□□ -0.07
Pcdhb4Q91XZ6 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb4Q91XZ6 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb4Q91XZ6 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb4Q91XZ6 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb4Q91XZ6 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb4Q91XZ6 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC14.59□□□□□ -0.07
Pcdhb4Q91XZ6 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb4Q91XZ6 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb4Q91XZ6 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb4Q91XZ6 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb4Q91XZ6 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb4Q91XZ6 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb4Q91XZ6 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb4Q91XZ6 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb4Q91XZ6 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb4Q91XZ6 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb4Q91XZ6 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.58□□□□□ -0.07
Pcdhb4Q91XZ6 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
Pcdhb4Q91XZ6 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Pcdhb4Q91XZ6 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb4Q91XZ6 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Pcdhb4Q91XZ6 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Pcdhb4Q91XZ6 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC14.58□□□□□ -0.08
Pcdhb4Q91XZ6 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC14.58□□□□□ -0.08
Pcdhb4Q91XZ6 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb4Q91XZ6 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb4Q91XZ6 Gm13036-201ENSMUST00000117799 748 ntBASIC14.58□□□□□ -0.08
Pcdhb4Q91XZ6 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb4Q91XZ6 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC14.58□□□□□ -0.08
Pcdhb4Q91XZ6 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb4Q91XZ6 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Pcdhb4Q91XZ6 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb4Q91XZ6 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC14.58□□□□□ -0.08
Pcdhb4Q91XZ6 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb4Q91XZ6 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb4Q91XZ6 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Pcdhb4Q91XZ6 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb4Q91XZ6 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb4Q91XZ6 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC14.58□□□□□ -0.08
Pcdhb4Q91XZ6 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb4Q91XZ6 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb4Q91XZ6 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb4Q91XZ6 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb4Q91XZ6 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Pcdhb4Q91XZ6 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb4Q91XZ6 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb4Q91XZ6 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb4Q91XZ6 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb4Q91XZ6 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb4Q91XZ6 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb4Q91XZ6 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb4Q91XZ6 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb4Q91XZ6 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb4Q91XZ6 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb4Q91XZ6 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb4Q91XZ6 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb4Q91XZ6 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb4Q91XZ6 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
Pcdhb4Q91XZ6 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb4Q91XZ6 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb4Q91XZ6 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb4Q91XZ6 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Pcdhb4Q91XZ6 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb4Q91XZ6 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb4Q91XZ6 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms