Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb8Q91XZ2 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Pcdhb8Q91XZ2 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb8Q91XZ2 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
Pcdhb8Q91XZ2 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb8Q91XZ2 AC131743.5-201ENSMUST00000220775 1618 ntBASIC14.34□□□□□ -0.11
Pcdhb8Q91XZ2 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb8Q91XZ2 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb8Q91XZ2 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC14.34□□□□□ -0.11
Pcdhb8Q91XZ2 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC14.34□□□□□ -0.11
Pcdhb8Q91XZ2 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb8Q91XZ2 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb8Q91XZ2 Gm14140-201ENSMUST00000119999 995 ntBASIC14.34□□□□□ -0.11
Pcdhb8Q91XZ2 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC14.34□□□□□ -0.11
Pcdhb8Q91XZ2 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb8Q91XZ2 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC14.34□□□□□ -0.11
Pcdhb8Q91XZ2 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC14.34□□□□□ -0.11
Pcdhb8Q91XZ2 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb8Q91XZ2 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb8Q91XZ2 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb8Q91XZ2 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb8Q91XZ2 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb8Q91XZ2 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb8Q91XZ2 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.34□□□□□ -0.11
Pcdhb8Q91XZ2 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb8Q91XZ2 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC14.34□□□□□ -0.11
Pcdhb8Q91XZ2 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb8Q91XZ2 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb8Q91XZ2 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Pcdhb8Q91XZ2 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb8Q91XZ2 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb8Q91XZ2 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb8Q91XZ2 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Pcdhb8Q91XZ2 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb8Q91XZ2 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pcdhb8Q91XZ2 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pcdhb8Q91XZ2 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pcdhb8Q91XZ2 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pcdhb8Q91XZ2 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pcdhb8Q91XZ2 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhb8Q91XZ2 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Pcdhb8Q91XZ2 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhb8Q91XZ2 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhb8Q91XZ2 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Pcdhb8Q91XZ2 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Pcdhb8Q91XZ2 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC14.33□□□□□ -0.12
Pcdhb8Q91XZ2 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC14.33□□□□□ -0.12
Pcdhb8Q91XZ2 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC14.33□□□□□ -0.12
Pcdhb8Q91XZ2 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC14.33□□□□□ -0.12
Pcdhb8Q91XZ2 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC14.33□□□□□ -0.12
Pcdhb8Q91XZ2 Mir7036b-201ENSMUST00000184791 63 ntBASIC14.33□□□□□ -0.12
Pcdhb8Q91XZ2 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC14.33□□□□□ -0.12
Pcdhb8Q91XZ2 Gm2272-201ENSMUST00000194903 582 ntBASIC14.33□□□□□ -0.12
Pcdhb8Q91XZ2 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC14.33□□□□□ -0.12
Pcdhb8Q91XZ2 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.33□□□□□ -0.12
Pcdhb8Q91XZ2 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhb8Q91XZ2 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhb8Q91XZ2 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhb8Q91XZ2 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhb8Q91XZ2 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhb8Q91XZ2 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhb8Q91XZ2 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhb8Q91XZ2 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhb8Q91XZ2 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhb8Q91XZ2 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhb8Q91XZ2 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhb8Q91XZ2 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhb8Q91XZ2 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Pcdhb8Q91XZ2 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhb8Q91XZ2 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Pcdhb8Q91XZ2 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Pcdhb8Q91XZ2 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.32□□□□□ -0.12
Pcdhb8Q91XZ2 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhb8Q91XZ2 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhb8Q91XZ2 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Pcdhb8Q91XZ2 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhb8Q91XZ2 Gm8096-201ENSMUST00000209921 1591 ntBASIC14.32□□□□□ -0.12
Pcdhb8Q91XZ2 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
Pcdhb8Q91XZ2 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC14.32□□□□□ -0.12
Pcdhb8Q91XZ2 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC14.32□□□□□ -0.12
Pcdhb8Q91XZ2 AC133598.3-202ENSMUST00000224219 531 ntBASIC14.32□□□□□ -0.12
Pcdhb8Q91XZ2 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhb8Q91XZ2 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhb8Q91XZ2 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhb8Q91XZ2 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhb8Q91XZ2 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhb8Q91XZ2 Gm37297-201ENSMUST00000192974 2384 ntBASIC14.32□□□□□ -0.12
Pcdhb8Q91XZ2 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhb8Q91XZ2 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhb8Q91XZ2 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhb8Q91XZ2 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
Pcdhb8Q91XZ2 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhb8Q91XZ2 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhb8Q91XZ2 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhb8Q91XZ2 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhb8Q91XZ2 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhb8Q91XZ2 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhb8Q91XZ2 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhb8Q91XZ2 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Pcdhb8Q91XZ2 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms