Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Gm4899-201ENSMUST00000178708 719 ntBASIC14.2□□□□□ -0.14
Pcdhga11Q91XY8 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhga11Q91XY8 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC14.2□□□□□ -0.14
Pcdhga11Q91XY8 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC14.2□□□□□ -0.14
Pcdhga11Q91XY8 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC14.2□□□□□ -0.14
Pcdhga11Q91XY8 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhga11Q91XY8 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhga11Q91XY8 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Pcdhga11Q91XY8 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC14.2□□□□□ -0.14
Pcdhga11Q91XY8 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhga11Q91XY8 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhga11Q91XY8 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhga11Q91XY8 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Pcdhga11Q91XY8 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhga11Q91XY8 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhga11Q91XY8 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhga11Q91XY8 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhga11Q91XY8 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhga11Q91XY8 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Pcdhga11Q91XY8 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhga11Q91XY8 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhga11Q91XY8 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhga11Q91XY8 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhga11Q91XY8 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhga11Q91XY8 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhga11Q91XY8 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhga11Q91XY8 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhga11Q91XY8 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC14.19□□□□□ -0.14
Pcdhga11Q91XY8 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Pcdhga11Q91XY8 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhga11Q91XY8 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhga11Q91XY8 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhga11Q91XY8 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhga11Q91XY8 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC14.19□□□□□ -0.14
Pcdhga11Q91XY8 Gm13036-201ENSMUST00000117799 748 ntBASIC14.19□□□□□ -0.14
Pcdhga11Q91XY8 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC14.19□□□□□ -0.14
Pcdhga11Q91XY8 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC14.19□□□□□ -0.14
Pcdhga11Q91XY8 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhga11Q91XY8 Gm5712-201ENSMUST00000199748 1043 ntBASIC14.19□□□□□ -0.14
Pcdhga11Q91XY8 Gm42670-201ENSMUST00000201816 1292 ntBASIC14.19□□□□□ -0.14
Pcdhga11Q91XY8 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC14.19□□□□□ -0.14
Pcdhga11Q91XY8 Gm43935-201ENSMUST00000203569 1050 ntBASIC14.19□□□□□ -0.14
Pcdhga11Q91XY8 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC14.19□□□□□ -0.14
Pcdhga11Q91XY8 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC14.19□□□□□ -0.14
Pcdhga11Q91XY8 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhga11Q91XY8 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhga11Q91XY8 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhga11Q91XY8 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhga11Q91XY8 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhga11Q91XY8 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhga11Q91XY8 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhga11Q91XY8 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhga11Q91XY8 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.19□□□□□ -0.14
Pcdhga11Q91XY8 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhga11Q91XY8 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhga11Q91XY8 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhga11Q91XY8 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhga11Q91XY8 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC14.18□□□□□ -0.14
Pcdhga11Q91XY8 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhga11Q91XY8 Gm13294-201ENSMUST00000121757 1330 ntBASIC14.18□□□□□ -0.14
Pcdhga11Q91XY8 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Pcdhga11Q91XY8 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhga11Q91XY8 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhga11Q91XY8 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhga11Q91XY8 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhga11Q91XY8 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Pcdhga11Q91XY8 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhga11Q91XY8 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhga11Q91XY8 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhga11Q91XY8 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhga11Q91XY8 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhga11Q91XY8 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhga11Q91XY8 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhga11Q91XY8 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhga11Q91XY8 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC14.18□□□□□ -0.14
Pcdhga11Q91XY8 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhga11Q91XY8 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhga11Q91XY8 Gm27525-201ENSMUST00000184465 107 ntBASIC14.18□□□□□ -0.14
Pcdhga11Q91XY8 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhga11Q91XY8 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC14.18□□□□□ -0.14
Pcdhga11Q91XY8 Gm5364-201ENSMUST00000216789 889 ntBASIC14.18□□□□□ -0.14
Pcdhga11Q91XY8 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC14.18□□□□□ -0.14
Pcdhga11Q91XY8 Gm15590-201ENSMUST00000078419 552 ntBASIC14.18□□□□□ -0.14
Pcdhga11Q91XY8 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhga11Q91XY8 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhga11Q91XY8 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhga11Q91XY8 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhga11Q91XY8 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhga11Q91XY8 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC14.18□□□□□ -0.14
Pcdhga11Q91XY8 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhga11Q91XY8 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Pcdhga11Q91XY8 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
Pcdhga11Q91XY8 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhga11Q91XY8 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Pcdhga11Q91XY8 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhga11Q91XY8 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC14.17□□□□□ -0.14
Pcdhga11Q91XY8 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhga11Q91XY8 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhga11Q91XY8 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhga11Q91XY8 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms