Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhga4Q91XY4 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhga4Q91XY4 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhga4Q91XY4 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhga4Q91XY4 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
Pcdhga4Q91XY4 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhga4Q91XY4 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhga4Q91XY4 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.47□□□□□ -0.09
Pcdhga4Q91XY4 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC14.47□□□□□ -0.09
Pcdhga4Q91XY4 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhga4Q91XY4 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.47□□□□□ -0.09
Pcdhga4Q91XY4 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhga4Q91XY4 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.09
Pcdhga4Q91XY4 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhga4Q91XY4 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhga4Q91XY4 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC14.46□□□□□ -0.09
Pcdhga4Q91XY4 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhga4Q91XY4 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhga4Q91XY4 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhga4Q91XY4 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhga4Q91XY4 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhga4Q91XY4 Gm14822-201ENSMUST00000122247 291 ntBASIC14.46□□□□□ -0.09
Pcdhga4Q91XY4 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC14.46□□□□□ -0.09
Pcdhga4Q91XY4 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC14.46□□□□□ -0.09
Pcdhga4Q91XY4 Gm11025-201ENSMUST00000140773 466 ntBASIC14.46□□□□□ -0.09
Pcdhga4Q91XY4 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC14.46□□□□□ -0.09
Pcdhga4Q91XY4 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC14.46□□□□□ -0.09
Pcdhga4Q91XY4 Gm25911-201ENSMUST00000157621 56 ntBASIC14.46□□□□□ -0.09
Pcdhga4Q91XY4 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Pcdhga4Q91XY4 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14.46□□□□□ -0.09
Pcdhga4Q91XY4 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhga4Q91XY4 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhga4Q91XY4 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhga4Q91XY4 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhga4Q91XY4 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhga4Q91XY4 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhga4Q91XY4 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhga4Q91XY4 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdhga4Q91XY4 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdhga4Q91XY4 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdhga4Q91XY4 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdhga4Q91XY4 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdhga4Q91XY4 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdhga4Q91XY4 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Pcdhga4Q91XY4 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdhga4Q91XY4 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdhga4Q91XY4 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdhga4Q91XY4 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhga4Q91XY4 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC14.45□□□□□ -0.1
Pcdhga4Q91XY4 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhga4Q91XY4 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhga4Q91XY4 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhga4Q91XY4 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhga4Q91XY4 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Pcdhga4Q91XY4 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC14.45□□□□□ -0.1
Pcdhga4Q91XY4 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhga4Q91XY4 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhga4Q91XY4 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhga4Q91XY4 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhga4Q91XY4 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhga4Q91XY4 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Pcdhga4Q91XY4 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC14.45□□□□□ -0.1
Pcdhga4Q91XY4 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC14.45□□□□□ -0.1
Pcdhga4Q91XY4 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhga4Q91XY4 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhga4Q91XY4 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhga4Q91XY4 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhga4Q91XY4 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Pcdhga4Q91XY4 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Pcdhga4Q91XY4 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhga4Q91XY4 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhga4Q91XY4 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhga4Q91XY4 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhga4Q91XY4 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhga4Q91XY4 AC025913.2-201ENSMUST00000220136 1766 ntBASIC14.45□□□□□ -0.1
Pcdhga4Q91XY4 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhga4Q91XY4 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhga4Q91XY4 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhga4Q91XY4 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhga4Q91XY4 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
Pcdhga4Q91XY4 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhga4Q91XY4 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhga4Q91XY4 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhga4Q91XY4 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.44□□□□□ -0.1
Pcdhga4Q91XY4 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC14.44□□□□□ -0.1
Pcdhga4Q91XY4 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Pcdhga4Q91XY4 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhga4Q91XY4 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhga4Q91XY4 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhga4Q91XY4 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Pcdhga4Q91XY4 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhga4Q91XY4 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhga4Q91XY4 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhga4Q91XY4 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhga4Q91XY4 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC14.44□□□□□ -0.1
Pcdhga4Q91XY4 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhga4Q91XY4 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhga4Q91XY4 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC14.44□□□□□ -0.1
Pcdhga4Q91XY4 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdhga4Q91XY4 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms