Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Ddx41Q91VN6 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Ddx41Q91VN6 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
Ddx41Q91VN6 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Ddx41Q91VN6 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ddx41Q91VN6 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ddx41Q91VN6 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ddx41Q91VN6 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ddx41Q91VN6 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC16.83■□□□□ 0.28
Ddx41Q91VN6 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC16.83■□□□□ 0.28
Ddx41Q91VN6 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC16.83■□□□□ 0.28
Ddx41Q91VN6 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ddx41Q91VN6 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC16.83■□□□□ 0.28
Ddx41Q91VN6 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ddx41Q91VN6 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC16.83■□□□□ 0.28
Ddx41Q91VN6 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ddx41Q91VN6 Gm6018-201ENSMUST00000216090 1306 ntBASIC16.83■□□□□ 0.28
Ddx41Q91VN6 CT009510.1-201ENSMUST00000227972 270 ntBASIC16.83■□□□□ 0.28
Ddx41Q91VN6 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ddx41Q91VN6 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ddx41Q91VN6 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ddx41Q91VN6 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ddx41Q91VN6 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ddx41Q91VN6 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ddx41Q91VN6 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Ddx41Q91VN6 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ddx41Q91VN6 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ddx41Q91VN6 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ddx41Q91VN6 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ddx41Q91VN6 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC16.83■□□□□ 0.28
Ddx41Q91VN6 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ddx41Q91VN6 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC16.83■□□□□ 0.28
Ddx41Q91VN6 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ddx41Q91VN6 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
Ddx41Q91VN6 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC16.82■□□□□ 0.28
Ddx41Q91VN6 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx41Q91VN6 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx41Q91VN6 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC16.82■□□□□ 0.28
Ddx41Q91VN6 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx41Q91VN6 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
Ddx41Q91VN6 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Ddx41Q91VN6 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx41Q91VN6 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx41Q91VN6 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx41Q91VN6 Gm12017-201ENSMUST00000122453 1003 ntBASIC16.82■□□□□ 0.28
Ddx41Q91VN6 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC16.82■□□□□ 0.28
Ddx41Q91VN6 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx41Q91VN6 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx41Q91VN6 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx41Q91VN6 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC16.82■□□□□ 0.28
Ddx41Q91VN6 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC16.82■□□□□ 0.28
Ddx41Q91VN6 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC16.82■□□□□ 0.28
Ddx41Q91VN6 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx41Q91VN6 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx41Q91VN6 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC16.82■□□□□ 0.28
Ddx41Q91VN6 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx41Q91VN6 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx41Q91VN6 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx41Q91VN6 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx41Q91VN6 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Ddx41Q91VN6 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx41Q91VN6 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Ddx41Q91VN6 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Ddx41Q91VN6 Ptprs-211ENSMUST00000223859 5588 ntBASIC16.81■□□□□ 0.28
Ddx41Q91VN6 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx41Q91VN6 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC16.81■□□□□ 0.28
Ddx41Q91VN6 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx41Q91VN6 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx41Q91VN6 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
Ddx41Q91VN6 Fgf17-202ENSMUST00000227123 1336 ntBASIC16.81■□□□□ 0.28
Ddx41Q91VN6 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx41Q91VN6 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx41Q91VN6 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Ddx41Q91VN6 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx41Q91VN6 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Ddx41Q91VN6 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx41Q91VN6 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx41Q91VN6 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Ddx41Q91VN6 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
Ddx41Q91VN6 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Ddx41Q91VN6 Gm25948-201ENSMUST00000175334 112 ntBASIC16.81■□□□□ 0.28
Ddx41Q91VN6 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx41Q91VN6 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx41Q91VN6 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx41Q91VN6 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx41Q91VN6 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx41Q91VN6 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx41Q91VN6 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx41Q91VN6 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Ddx41Q91VN6 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx41Q91VN6 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx41Q91VN6 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx41Q91VN6 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx41Q91VN6 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC16.81■□□□□ 0.28
Ddx41Q91VN6 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ddx41Q91VN6 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ddx41Q91VN6 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Ddx41Q91VN6 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ddx41Q91VN6 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ddx41Q91VN6 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms