Protein–RNA interactions for Protein: Q91UZ8

Pcdhb11, MCG141285, mousemouse

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb11Q91UZ8 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb11Q91UZ8 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb11Q91UZ8 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb11Q91UZ8 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb11Q91UZ8 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Pcdhb11Q91UZ8 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC15.01□□□□□ -0.01
Pcdhb11Q91UZ8 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC15.01□□□□□ -0.01
Pcdhb11Q91UZ8 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC15.01□□□□□ -0.01
Pcdhb11Q91UZ8 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb11Q91UZ8 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb11Q91UZ8 Gm9726-201ENSMUST00000180321 678 ntBASIC15.01□□□□□ -0.01
Pcdhb11Q91UZ8 Gm29179-208ENSMUST00000190450 1137 ntTSL 5 BASIC15.01□□□□□ -0.01
Pcdhb11Q91UZ8 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb11Q91UZ8 Gm42790-201ENSMUST00000201268 969 ntBASIC15.01□□□□□ -0.01
Pcdhb11Q91UZ8 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Pcdhb11Q91UZ8 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb11Q91UZ8 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb11Q91UZ8 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC15.01□□□□□ -0.01
Pcdhb11Q91UZ8 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC15.01□□□□□ -0.01
Pcdhb11Q91UZ8 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb11Q91UZ8 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb11Q91UZ8 Gm5648-201ENSMUST00000122244 1587 ntBASIC15.01□□□□□ -0.01
Pcdhb11Q91UZ8 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Pcdhb11Q91UZ8 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Pcdhb11Q91UZ8 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb11Q91UZ8 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb11Q91UZ8 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb11Q91UZ8 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Pcdhb11Q91UZ8 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb11Q91UZ8 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb11Q91UZ8 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC15.01□□□□□ -0.01
Pcdhb11Q91UZ8 Gm11960-202ENSMUST00000181063 2858 ntBASIC15.01□□□□□ -0.01
Pcdhb11Q91UZ8 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb11Q91UZ8 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC15.01□□□□□ -0.01
Pcdhb11Q91UZ8 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb11Q91UZ8 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC15.01□□□□□ -0.01
Pcdhb11Q91UZ8 AC126250.1-201ENSMUST00000228343 1768 ntBASIC15.01□□□□□ -0.01
Pcdhb11Q91UZ8 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC15.01□□□□□ -0.01
Pcdhb11Q91UZ8 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb11Q91UZ8 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC15□□□□□ -0.01
Pcdhb11Q91UZ8 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhb11Q91UZ8 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhb11Q91UZ8 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC15□□□□□ -0.01
Pcdhb11Q91UZ8 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhb11Q91UZ8 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhb11Q91UZ8 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhb11Q91UZ8 Gm11745-201ENSMUST00000121669 448 ntBASIC15□□□□□ -0.01
Pcdhb11Q91UZ8 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC15□□□□□ -0.01
Pcdhb11Q91UZ8 Gm24513-201ENSMUST00000174964 138 ntBASIC15□□□□□ -0.01
Pcdhb11Q91UZ8 Gm6944-201ENSMUST00000182449 1006 ntBASIC15□□□□□ -0.01
Pcdhb11Q91UZ8 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC15□□□□□ -0.01
Pcdhb11Q91UZ8 Gm27494-201ENSMUST00000184735 189 ntBASIC15□□□□□ -0.01
Pcdhb11Q91UZ8 Olfr286-202ENSMUST00000205305 969 ntBASIC15□□□□□ -0.01
Pcdhb11Q91UZ8 Klk2-ps-201ENSMUST00000205342 571 ntBASIC15□□□□□ -0.01
Pcdhb11Q91UZ8 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC15□□□□□ -0.01
Pcdhb11Q91UZ8 Gm5628-201ENSMUST00000222318 1049 ntBASIC15□□□□□ -0.01
Pcdhb11Q91UZ8 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
Pcdhb11Q91UZ8 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC15□□□□□ -0.01
Pcdhb11Q91UZ8 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhb11Q91UZ8 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhb11Q91UZ8 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhb11Q91UZ8 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC15□□□□□ -0.01
Pcdhb11Q91UZ8 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC15□□□□□ -0.01
Pcdhb11Q91UZ8 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC15□□□□□ -0.01
Pcdhb11Q91UZ8 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhb11Q91UZ8 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhb11Q91UZ8 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhb11Q91UZ8 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
Pcdhb11Q91UZ8 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Pcdhb11Q91UZ8 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Pcdhb11Q91UZ8 Gm37305-201ENSMUST00000195714 4279 ntBASIC14.99□□□□□ -0.01
Pcdhb11Q91UZ8 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Pcdhb11Q91UZ8 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb11Q91UZ8 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.99□□□□□ -0.01
Pcdhb11Q91UZ8 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Pcdhb11Q91UZ8 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.99□□□□□ -0.01
Pcdhb11Q91UZ8 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Pcdhb11Q91UZ8 Gm37812-201ENSMUST00000195216 2475 ntBASIC14.99□□□□□ -0.01
Pcdhb11Q91UZ8 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC14.99□□□□□ -0.01
Pcdhb11Q91UZ8 Gm14822-201ENSMUST00000122247 291 ntBASIC14.99□□□□□ -0.01
Pcdhb11Q91UZ8 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC14.99□□□□□ -0.01
Pcdhb11Q91UZ8 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb11Q91UZ8 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb11Q91UZ8 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb11Q91UZ8 Gm27397-201ENSMUST00000184997 107 ntBASIC14.99□□□□□ -0.01
Pcdhb11Q91UZ8 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC14.99□□□□□ -0.01
Pcdhb11Q91UZ8 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC14.99□□□□□ -0.01
Pcdhb11Q91UZ8 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC14.99□□□□□ -0.01
Pcdhb11Q91UZ8 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Pcdhb11Q91UZ8 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.99□□□□□ -0.01
Pcdhb11Q91UZ8 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb11Q91UZ8 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Pcdhb11Q91UZ8 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb11Q91UZ8 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb11Q91UZ8 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb11Q91UZ8 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb11Q91UZ8 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb11Q91UZ8 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
Pcdhb11Q91UZ8 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
Pcdhb11Q91UZ8 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms