Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
StrcQ8VIM6 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
StrcQ8VIM6 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
StrcQ8VIM6 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
StrcQ8VIM6 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC17.12■□□□□ 0.33
StrcQ8VIM6 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC17.12■□□□□ 0.33
StrcQ8VIM6 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC17.12■□□□□ 0.33
StrcQ8VIM6 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
StrcQ8VIM6 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
StrcQ8VIM6 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
StrcQ8VIM6 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
StrcQ8VIM6 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
StrcQ8VIM6 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
StrcQ8VIM6 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
StrcQ8VIM6 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
StrcQ8VIM6 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
StrcQ8VIM6 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
StrcQ8VIM6 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
StrcQ8VIM6 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
StrcQ8VIM6 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
StrcQ8VIM6 Gm2639-201ENSMUST00000156881 1297 ntBASIC17.12■□□□□ 0.33
StrcQ8VIM6 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
StrcQ8VIM6 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC17.12■□□□□ 0.33
StrcQ8VIM6 Ighv1-62-201ENSMUST00000193406 350 ntBASIC17.12■□□□□ 0.33
StrcQ8VIM6 AC140406.1-201ENSMUST00000226481 465 ntBASIC17.12■□□□□ 0.33
StrcQ8VIM6 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC17.12■□□□□ 0.33
StrcQ8VIM6 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
StrcQ8VIM6 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
StrcQ8VIM6 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
StrcQ8VIM6 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
StrcQ8VIM6 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
StrcQ8VIM6 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
StrcQ8VIM6 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
StrcQ8VIM6 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
StrcQ8VIM6 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC17.11■□□□□ 0.33
StrcQ8VIM6 Mir686-201ENSMUST00000102174 109 ntBASIC17.11■□□□□ 0.33
StrcQ8VIM6 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
StrcQ8VIM6 Gm12384-201ENSMUST00000119228 919 ntBASIC17.11■□□□□ 0.33
StrcQ8VIM6 Mir7070-201ENSMUST00000183657 86 ntBASIC17.11■□□□□ 0.33
StrcQ8VIM6 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
StrcQ8VIM6 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
StrcQ8VIM6 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC17.11■□□□□ 0.33
StrcQ8VIM6 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
StrcQ8VIM6 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
StrcQ8VIM6 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
StrcQ8VIM6 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
StrcQ8VIM6 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
StrcQ8VIM6 Gm20628-201ENSMUST00000177363 3215 ntBASIC17.11■□□□□ 0.33
StrcQ8VIM6 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
StrcQ8VIM6 Gm10156-201ENSMUST00000122364 462 ntBASIC17.1■□□□□ 0.33
StrcQ8VIM6 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
StrcQ8VIM6 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC17.1■□□□□ 0.33
StrcQ8VIM6 Gm27501-201ENSMUST00000183599 107 ntBASIC17.1■□□□□ 0.33
StrcQ8VIM6 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC17.1■□□□□ 0.33
StrcQ8VIM6 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC17.1■□□□□ 0.33
StrcQ8VIM6 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
StrcQ8VIM6 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
StrcQ8VIM6 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
StrcQ8VIM6 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
StrcQ8VIM6 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
StrcQ8VIM6 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
StrcQ8VIM6 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
StrcQ8VIM6 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
StrcQ8VIM6 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
StrcQ8VIM6 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
StrcQ8VIM6 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
StrcQ8VIM6 Gm8213-201ENSMUST00000118191 441 ntBASIC17.1■□□□□ 0.33
StrcQ8VIM6 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
StrcQ8VIM6 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
StrcQ8VIM6 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
StrcQ8VIM6 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC17.1■□□□□ 0.33
StrcQ8VIM6 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
StrcQ8VIM6 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
StrcQ8VIM6 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.09■□□□□ 0.33
StrcQ8VIM6 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC17.09■□□□□ 0.33
StrcQ8VIM6 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
StrcQ8VIM6 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
StrcQ8VIM6 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
StrcQ8VIM6 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
StrcQ8VIM6 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
StrcQ8VIM6 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
StrcQ8VIM6 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
StrcQ8VIM6 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
StrcQ8VIM6 Gm29608-201ENSMUST00000190444 463 ntBASIC17.09■□□□□ 0.33
StrcQ8VIM6 Gm44397-201ENSMUST00000195950 113 ntBASIC17.09■□□□□ 0.33
StrcQ8VIM6 Gm3786-201ENSMUST00000202659 378 ntBASIC17.09■□□□□ 0.33
StrcQ8VIM6 Gm17823-201ENSMUST00000217830 1006 ntBASIC17.09■□□□□ 0.33
StrcQ8VIM6 AC133598.1-201ENSMUST00000224327 660 ntBASIC17.09■□□□□ 0.33
StrcQ8VIM6 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
StrcQ8VIM6 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
StrcQ8VIM6 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
StrcQ8VIM6 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
StrcQ8VIM6 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
StrcQ8VIM6 Gm5620-201ENSMUST00000077991 1348 ntBASIC17.08■□□□□ 0.33
StrcQ8VIM6 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
StrcQ8VIM6 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
StrcQ8VIM6 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
StrcQ8VIM6 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC17.08■□□□□ 0.33
StrcQ8VIM6 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
StrcQ8VIM6 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms