Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
H1fooQ8VIK3 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
H1fooQ8VIK3 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
H1fooQ8VIK3 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
H1fooQ8VIK3 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
H1fooQ8VIK3 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
H1fooQ8VIK3 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
H1fooQ8VIK3 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
H1fooQ8VIK3 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
H1fooQ8VIK3 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
H1fooQ8VIK3 Gm12620-201ENSMUST00000119791 1986 ntBASIC12.29□□□□□ -0.44
H1fooQ8VIK3 Gm12612-201ENSMUST00000140182 1986 ntBASIC12.29□□□□□ -0.44
H1fooQ8VIK3 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC12.29□□□□□ -0.44
H1fooQ8VIK3 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
H1fooQ8VIK3 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
H1fooQ8VIK3 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC12.29□□□□□ -0.44
H1fooQ8VIK3 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC12.29□□□□□ -0.44
H1fooQ8VIK3 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC12.29□□□□□ -0.44
H1fooQ8VIK3 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
H1fooQ8VIK3 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
H1fooQ8VIK3 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC12.29□□□□□ -0.44
H1fooQ8VIK3 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
H1fooQ8VIK3 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC12.29□□□□□ -0.44
H1fooQ8VIK3 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
H1fooQ8VIK3 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC12.29□□□□□ -0.44
H1fooQ8VIK3 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
H1fooQ8VIK3 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
H1fooQ8VIK3 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
H1fooQ8VIK3 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
H1fooQ8VIK3 Ksr1-207ENSMUST00000226282 5260 ntBASIC12.29□□□□□ -0.44
H1fooQ8VIK3 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
H1fooQ8VIK3 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
H1fooQ8VIK3 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
H1fooQ8VIK3 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
H1fooQ8VIK3 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
H1fooQ8VIK3 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
H1fooQ8VIK3 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
H1fooQ8VIK3 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
H1fooQ8VIK3 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
H1fooQ8VIK3 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
H1fooQ8VIK3 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
H1fooQ8VIK3 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
H1fooQ8VIK3 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
H1fooQ8VIK3 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
H1fooQ8VIK3 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
H1fooQ8VIK3 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
H1fooQ8VIK3 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC12.28□□□□□ -0.44
H1fooQ8VIK3 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
H1fooQ8VIK3 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
H1fooQ8VIK3 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
H1fooQ8VIK3 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
H1fooQ8VIK3 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
H1fooQ8VIK3 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
H1fooQ8VIK3 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
H1fooQ8VIK3 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
H1fooQ8VIK3 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC12.28□□□□□ -0.44
H1fooQ8VIK3 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC12.28□□□□□ -0.44
H1fooQ8VIK3 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC12.28□□□□□ -0.44
H1fooQ8VIK3 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC12.28□□□□□ -0.44
H1fooQ8VIK3 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC12.28□□□□□ -0.44
H1fooQ8VIK3 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
H1fooQ8VIK3 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
H1fooQ8VIK3 Gm7461-201ENSMUST00000058918 827 ntBASIC12.28□□□□□ -0.44
H1fooQ8VIK3 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
H1fooQ8VIK3 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
H1fooQ8VIK3 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
H1fooQ8VIK3 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
H1fooQ8VIK3 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
H1fooQ8VIK3 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
H1fooQ8VIK3 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
H1fooQ8VIK3 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
H1fooQ8VIK3 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
H1fooQ8VIK3 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
H1fooQ8VIK3 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
H1fooQ8VIK3 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
H1fooQ8VIK3 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
H1fooQ8VIK3 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
H1fooQ8VIK3 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
H1fooQ8VIK3 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
H1fooQ8VIK3 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
H1fooQ8VIK3 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
H1fooQ8VIK3 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
H1fooQ8VIK3 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
H1fooQ8VIK3 Gm37297-201ENSMUST00000192974 2384 ntBASIC12.27□□□□□ -0.44
H1fooQ8VIK3 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
H1fooQ8VIK3 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
H1fooQ8VIK3 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
H1fooQ8VIK3 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
H1fooQ8VIK3 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
H1fooQ8VIK3 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
H1fooQ8VIK3 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC12.27□□□□□ -0.45
H1fooQ8VIK3 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
H1fooQ8VIK3 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC12.27□□□□□ -0.45
H1fooQ8VIK3 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC12.27□□□□□ -0.45
H1fooQ8VIK3 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC12.27□□□□□ -0.45
H1fooQ8VIK3 Gm18733-201ENSMUST00000173950 856 ntBASIC12.27□□□□□ -0.45
H1fooQ8VIK3 Gm27741-201ENSMUST00000185060 237 ntBASIC12.27□□□□□ -0.45
H1fooQ8VIK3 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
H1fooQ8VIK3 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
H1fooQ8VIK3 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 10.9 ms