Protein–RNA interactions for Protein: Q8VI88

Odf4, Outer dense fiber protein 4, mousemouse

Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Odf4Q8VI88 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Odf4Q8VI88 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Odf4Q8VI88 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Odf4Q8VI88 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Odf4Q8VI88 Gm43509-201ENSMUST00000196551 2594 ntBASIC13.18□□□□□ -0.3
Odf4Q8VI88 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Odf4Q8VI88 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Odf4Q8VI88 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Odf4Q8VI88 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Odf4Q8VI88 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Odf4Q8VI88 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Odf4Q8VI88 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Odf4Q8VI88 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Odf4Q8VI88 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Odf4Q8VI88 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.17□□□□□ -0.3
Odf4Q8VI88 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Odf4Q8VI88 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Odf4Q8VI88 Gm11764-201ENSMUST00000120221 623 ntBASIC13.17□□□□□ -0.3
Odf4Q8VI88 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC13.17□□□□□ -0.3
Odf4Q8VI88 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC13.17□□□□□ -0.3
Odf4Q8VI88 Mir3113-201ENSMUST00000175478 76 ntBASIC13.17□□□□□ -0.3
Odf4Q8VI88 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Odf4Q8VI88 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC13.17□□□□□ -0.3
Odf4Q8VI88 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC13.17□□□□□ -0.3
Odf4Q8VI88 AC093926.2-201ENSMUST00000214468 1228 ntBASIC13.17□□□□□ -0.3
Odf4Q8VI88 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Odf4Q8VI88 AC131709.1-201ENSMUST00000224731 1180 ntBASIC13.17□□□□□ -0.3
Odf4Q8VI88 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Odf4Q8VI88 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC13.17□□□□□ -0.3
Odf4Q8VI88 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Odf4Q8VI88 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC13.17□□□□□ -0.3
Odf4Q8VI88 Gm38327-201ENSMUST00000195852 1755 ntBASIC13.17□□□□□ -0.3
Odf4Q8VI88 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Odf4Q8VI88 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Odf4Q8VI88 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Odf4Q8VI88 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Odf4Q8VI88 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Odf4Q8VI88 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Odf4Q8VI88 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Odf4Q8VI88 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Odf4Q8VI88 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC13.16□□□□□ -0.3
Odf4Q8VI88 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Odf4Q8VI88 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Odf4Q8VI88 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Odf4Q8VI88 Gm19863-201ENSMUST00000192480 2218 ntBASIC13.16□□□□□ -0.3
Odf4Q8VI88 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Odf4Q8VI88 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
Odf4Q8VI88 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Odf4Q8VI88 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Odf4Q8VI88 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Odf4Q8VI88 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Odf4Q8VI88 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Odf4Q8VI88 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Odf4Q8VI88 Gm4995-201ENSMUST00000117247 432 ntBASIC13.16□□□□□ -0.3
Odf4Q8VI88 Gm11185-201ENSMUST00000117732 1007 ntBASIC13.16□□□□□ -0.3
Odf4Q8VI88 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Odf4Q8VI88 Gm6257-201ENSMUST00000163864 910 ntBASIC13.16□□□□□ -0.3
Odf4Q8VI88 Gm2308-201ENSMUST00000166539 1004 ntBASIC13.16□□□□□ -0.3
Odf4Q8VI88 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC13.16□□□□□ -0.3
Odf4Q8VI88 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Odf4Q8VI88 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Odf4Q8VI88 Gm7787-201ENSMUST00000216858 688 ntBASIC13.16□□□□□ -0.3
Odf4Q8VI88 Bloc1s5-203ENSMUST00000224902 612 ntBASIC13.16□□□□□ -0.3
Odf4Q8VI88 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC13.16□□□□□ -0.3
Odf4Q8VI88 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Odf4Q8VI88 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Odf4Q8VI88 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Odf4Q8VI88 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Odf4Q8VI88 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Odf4Q8VI88 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Odf4Q8VI88 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Odf4Q8VI88 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Odf4Q8VI88 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Odf4Q8VI88 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Odf4Q8VI88 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Odf4Q8VI88 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Odf4Q8VI88 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Odf4Q8VI88 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Odf4Q8VI88 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Odf4Q8VI88 Gm11873-201ENSMUST00000117877 1304 ntBASIC13.15□□□□□ -0.3
Odf4Q8VI88 Gm5357-201ENSMUST00000212720 1924 ntBASIC13.15□□□□□ -0.3
Odf4Q8VI88 Camk2g-217ENSMUST00000226630 1937 ntBASIC13.15□□□□□ -0.3
Odf4Q8VI88 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Odf4Q8VI88 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Odf4Q8VI88 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Odf4Q8VI88 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
Odf4Q8VI88 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Odf4Q8VI88 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Odf4Q8VI88 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Odf4Q8VI88 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Odf4Q8VI88 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
Odf4Q8VI88 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC13.15□□□□□ -0.3
Odf4Q8VI88 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC13.15□□□□□ -0.3
Odf4Q8VI88 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC13.15□□□□□ -0.3
Odf4Q8VI88 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Odf4Q8VI88 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
Odf4Q8VI88 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Odf4Q8VI88 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Odf4Q8VI88 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Odf4Q8VI88 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms