Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC15.18■□□□□ 0.02
Trim60Q8VI40 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim60Q8VI40 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim60Q8VI40 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim60Q8VI40 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trim60Q8VI40 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim60Q8VI40 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim60Q8VI40 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Trim60Q8VI40 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trim60Q8VI40 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC15.18■□□□□ 0.02
Trim60Q8VI40 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim60Q8VI40 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Trim60Q8VI40 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim60Q8VI40 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trim60Q8VI40 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim60Q8VI40 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim60Q8VI40 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim60Q8VI40 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim60Q8VI40 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim60Q8VI40 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim60Q8VI40 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trim60Q8VI40 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trim60Q8VI40 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim60Q8VI40 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trim60Q8VI40 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim60Q8VI40 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim60Q8VI40 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim60Q8VI40 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim60Q8VI40 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim60Q8VI40 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim60Q8VI40 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim60Q8VI40 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim60Q8VI40 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim60Q8VI40 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim60Q8VI40 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC15.17■□□□□ 0.02
Trim60Q8VI40 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Trim60Q8VI40 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim60Q8VI40 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim60Q8VI40 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim60Q8VI40 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim60Q8VI40 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Trim60Q8VI40 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trim60Q8VI40 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Trim60Q8VI40 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim60Q8VI40 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim60Q8VI40 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
Trim60Q8VI40 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim60Q8VI40 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC15.17■□□□□ 0.02
Trim60Q8VI40 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC15.17■□□□□ 0.02
Trim60Q8VI40 Gm9726-201ENSMUST00000180321 678 ntBASIC15.17■□□□□ 0.02
Trim60Q8VI40 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC15.17■□□□□ 0.02
Trim60Q8VI40 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim60Q8VI40 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim60Q8VI40 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim60Q8VI40 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Trim60Q8VI40 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC15.17■□□□□ 0.02
Trim60Q8VI40 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim60Q8VI40 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Trim60Q8VI40 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim60Q8VI40 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim60Q8VI40 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC15.17■□□□□ 0.02
Trim60Q8VI40 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim60Q8VI40 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC15.17■□□□□ 0.02
Trim60Q8VI40 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim60Q8VI40 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim60Q8VI40 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trim60Q8VI40 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim60Q8VI40 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim60Q8VI40 AC025913.2-201ENSMUST00000220136 1766 ntBASIC15.16■□□□□ 0.02
Trim60Q8VI40 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trim60Q8VI40 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Trim60Q8VI40 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim60Q8VI40 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim60Q8VI40 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trim60Q8VI40 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim60Q8VI40 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim60Q8VI40 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Trim60Q8VI40 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC15.16■□□□□ 0.02
Trim60Q8VI40 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Trim60Q8VI40 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trim60Q8VI40 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC15.16■□□□□ 0.02
Trim60Q8VI40 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trim60Q8VI40 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC15.16■□□□□ 0.02
Trim60Q8VI40 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC15.16■□□□□ 0.02
Trim60Q8VI40 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trim60Q8VI40 AV026068-213ENSMUST00000223675 1171 ntBASIC15.16■□□□□ 0.02
Trim60Q8VI40 AC155729.1-201ENSMUST00000227758 544 ntBASIC15.16■□□□□ 0.02
Trim60Q8VI40 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim60Q8VI40 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim60Q8VI40 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim60Q8VI40 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Trim60Q8VI40 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trim60Q8VI40 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim60Q8VI40 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC15.16■□□□□ 0.02
Trim60Q8VI40 Gm14451-201ENSMUST00000121581 1542 ntBASIC15.16■□□□□ 0.02
Trim60Q8VI40 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trim60Q8VI40 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim60Q8VI40 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim60Q8VI40 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim60Q8VI40 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms