Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rpa1Q8VEE4 Gm30238-201ENSMUST00000195528 2603 ntBASIC14.8□□□□□ -0.04
Rpa1Q8VEE4 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Rpa1Q8VEE4 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Rpa1Q8VEE4 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rpa1Q8VEE4 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Rpa1Q8VEE4 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rpa1Q8VEE4 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rpa1Q8VEE4 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Rpa1Q8VEE4 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rpa1Q8VEE4 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rpa1Q8VEE4 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rpa1Q8VEE4 Gm4459-201ENSMUST00000118750 468 ntBASIC14.8□□□□□ -0.04
Rpa1Q8VEE4 Gm15358-201ENSMUST00000119249 520 ntBASIC14.8□□□□□ -0.04
Rpa1Q8VEE4 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC14.8□□□□□ -0.04
Rpa1Q8VEE4 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC14.8□□□□□ -0.04
Rpa1Q8VEE4 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
Rpa1Q8VEE4 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC14.8□□□□□ -0.04
Rpa1Q8VEE4 Gm43767-201ENSMUST00000198933 381 ntBASIC14.8□□□□□ -0.04
Rpa1Q8VEE4 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Rpa1Q8VEE4 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Rpa1Q8VEE4 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rpa1Q8VEE4 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rpa1Q8VEE4 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rpa1Q8VEE4 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Rpa1Q8VEE4 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rpa1Q8VEE4 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC14.8□□□□□ -0.04
Rpa1Q8VEE4 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rpa1Q8VEE4 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rpa1Q8VEE4 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rpa1Q8VEE4 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rpa1Q8VEE4 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rpa1Q8VEE4 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rpa1Q8VEE4 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
Rpa1Q8VEE4 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rpa1Q8VEE4 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rpa1Q8VEE4 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC14.79□□□□□ -0.04
Rpa1Q8VEE4 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rpa1Q8VEE4 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC14.79□□□□□ -0.04
Rpa1Q8VEE4 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC14.79□□□□□ -0.04
Rpa1Q8VEE4 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rpa1Q8VEE4 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Rpa1Q8VEE4 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Rpa1Q8VEE4 Gm29361-201ENSMUST00000183323 2000 ntBASIC14.79□□□□□ -0.04
Rpa1Q8VEE4 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rpa1Q8VEE4 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Rpa1Q8VEE4 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC14.79□□□□□ -0.04
Rpa1Q8VEE4 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rpa1Q8VEE4 AC093926.2-201ENSMUST00000214468 1228 ntBASIC14.79□□□□□ -0.04
Rpa1Q8VEE4 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rpa1Q8VEE4 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rpa1Q8VEE4 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC14.79□□□□□ -0.04
Rpa1Q8VEE4 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rpa1Q8VEE4 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC14.79□□□□□ -0.04
Rpa1Q8VEE4 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC14.79□□□□□ -0.04
Rpa1Q8VEE4 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rpa1Q8VEE4 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rpa1Q8VEE4 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rpa1Q8VEE4 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Rpa1Q8VEE4 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Rpa1Q8VEE4 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rpa1Q8VEE4 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rpa1Q8VEE4 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rpa1Q8VEE4 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC14.79□□□□□ -0.04
Rpa1Q8VEE4 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC14.79□□□□□ -0.04
Rpa1Q8VEE4 Gm43056-201ENSMUST00000197865 2791 ntBASIC14.79□□□□□ -0.04
Rpa1Q8VEE4 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Rpa1Q8VEE4 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rpa1Q8VEE4 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC14.78□□□□□ -0.04
Rpa1Q8VEE4 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rpa1Q8VEE4 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rpa1Q8VEE4 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rpa1Q8VEE4 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC14.78□□□□□ -0.04
Rpa1Q8VEE4 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rpa1Q8VEE4 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rpa1Q8VEE4 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Rpa1Q8VEE4 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.78□□□□□ -0.04
Rpa1Q8VEE4 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
Rpa1Q8VEE4 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rpa1Q8VEE4 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rpa1Q8VEE4 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rpa1Q8VEE4 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rpa1Q8VEE4 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rpa1Q8VEE4 Gm12497-201ENSMUST00000138778 237 ntBASIC14.78□□□□□ -0.04
Rpa1Q8VEE4 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC14.78□□□□□ -0.04
Rpa1Q8VEE4 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Rpa1Q8VEE4 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rpa1Q8VEE4 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rpa1Q8VEE4 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rpa1Q8VEE4 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rpa1Q8VEE4 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rpa1Q8VEE4 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rpa1Q8VEE4 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rpa1Q8VEE4 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rpa1Q8VEE4 Gm12500-202ENSMUST00000186471 2428 ntBASIC14.78□□□□□ -0.04
Rpa1Q8VEE4 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC14.78□□□□□ -0.04
Rpa1Q8VEE4 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rpa1Q8VEE4 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rpa1Q8VEE4 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rpa1Q8VEE4 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms