Protein–RNA interactions for Protein: Q8R429

Atp2a1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp2a1Q8R429 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Atp2a1Q8R429 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Atp2a1Q8R429 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Atp2a1Q8R429 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Atp2a1Q8R429 Gm8410-201ENSMUST00000117225 605 ntBASIC16.38■□□□□ 0.21
Atp2a1Q8R429 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC16.38■□□□□ 0.21
Atp2a1Q8R429 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Atp2a1Q8R429 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Atp2a1Q8R429 Gm6888-201ENSMUST00000221983 706 ntBASIC16.38■□□□□ 0.21
Atp2a1Q8R429 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Atp2a1Q8R429 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Atp2a1Q8R429 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Atp2a1Q8R429 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Atp2a1Q8R429 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Atp2a1Q8R429 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Atp2a1Q8R429 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Atp2a1Q8R429 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Atp2a1Q8R429 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Atp2a1Q8R429 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Atp2a1Q8R429 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Atp2a1Q8R429 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
Atp2a1Q8R429 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Atp2a1Q8R429 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Atp2a1Q8R429 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Atp2a1Q8R429 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Atp2a1Q8R429 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Atp2a1Q8R429 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC16.37■□□□□ 0.21
Atp2a1Q8R429 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Atp2a1Q8R429 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Atp2a1Q8R429 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Atp2a1Q8R429 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Atp2a1Q8R429 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Atp2a1Q8R429 Gm12151-201ENSMUST00000121374 290 ntBASIC16.37■□□□□ 0.21
Atp2a1Q8R429 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC16.37■□□□□ 0.21
Atp2a1Q8R429 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Atp2a1Q8R429 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC16.37■□□□□ 0.21
Atp2a1Q8R429 Wdyhv1-203ENSMUST00000226889 394 ntBASIC16.37■□□□□ 0.21
Atp2a1Q8R429 Wdyhv1-206ENSMUST00000227142 786 ntBASIC16.37■□□□□ 0.21
Atp2a1Q8R429 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Atp2a1Q8R429 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Atp2a1Q8R429 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC16.37■□□□□ 0.21
Atp2a1Q8R429 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Atp2a1Q8R429 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Atp2a1Q8R429 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Atp2a1Q8R429 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Atp2a1Q8R429 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Atp2a1Q8R429 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Atp2a1Q8R429 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Atp2a1Q8R429 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Atp2a1Q8R429 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Atp2a1Q8R429 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Atp2a1Q8R429 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Atp2a1Q8R429 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Atp2a1Q8R429 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Atp2a1Q8R429 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC16.36■□□□□ 0.21
Atp2a1Q8R429 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Atp2a1Q8R429 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC16.36■□□□□ 0.21
Atp2a1Q8R429 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Atp2a1Q8R429 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Atp2a1Q8R429 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Atp2a1Q8R429 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Atp2a1Q8R429 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Atp2a1Q8R429 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Atp2a1Q8R429 Gm13823-201ENSMUST00000119930 345 ntBASIC16.36■□□□□ 0.21
Atp2a1Q8R429 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Atp2a1Q8R429 Gm6944-201ENSMUST00000182449 1006 ntBASIC16.36■□□□□ 0.21
Atp2a1Q8R429 Mir8102-201ENSMUST00000184148 139 ntBASIC16.36■□□□□ 0.21
Atp2a1Q8R429 Gm27989-201ENSMUST00000184721 107 ntBASIC16.36■□□□□ 0.21
Atp2a1Q8R429 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC16.36■□□□□ 0.21
Atp2a1Q8R429 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC16.36■□□□□ 0.21
Atp2a1Q8R429 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC16.36■□□□□ 0.21
Atp2a1Q8R429 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Atp2a1Q8R429 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Atp2a1Q8R429 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Atp2a1Q8R429 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Atp2a1Q8R429 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Atp2a1Q8R429 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Atp2a1Q8R429 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Atp2a1Q8R429 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Atp2a1Q8R429 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Atp2a1Q8R429 Gm13034-201ENSMUST00000121342 3177 ntBASIC16.36■□□□□ 0.21
Atp2a1Q8R429 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Atp2a1Q8R429 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Atp2a1Q8R429 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Atp2a1Q8R429 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Atp2a1Q8R429 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Atp2a1Q8R429 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Atp2a1Q8R429 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Atp2a1Q8R429 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Atp2a1Q8R429 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Atp2a1Q8R429 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Atp2a1Q8R429 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
Atp2a1Q8R429 Gm13464-201ENSMUST00000119418 935 ntBASIC16.35■□□□□ 0.21
Atp2a1Q8R429 Gm12428-201ENSMUST00000119844 727 ntBASIC16.35■□□□□ 0.21
Atp2a1Q8R429 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC16.35■□□□□ 0.21
Atp2a1Q8R429 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Atp2a1Q8R429 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC16.35■□□□□ 0.21
Atp2a1Q8R429 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC16.35■□□□□ 0.21
Atp2a1Q8R429 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Atp2a1Q8R429 Gm27437-201ENSMUST00000183429 107 ntBASIC16.35■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms