Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nudcd3Q8R1N4 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nudcd3Q8R1N4 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Nudcd3Q8R1N4 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nudcd3Q8R1N4 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nudcd3Q8R1N4 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Nudcd3Q8R1N4 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Nudcd3Q8R1N4 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Nudcd3Q8R1N4 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nudcd3Q8R1N4 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nudcd3Q8R1N4 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
Nudcd3Q8R1N4 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nudcd3Q8R1N4 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Nudcd3Q8R1N4 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nudcd3Q8R1N4 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Nudcd3Q8R1N4 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.68□□□□□ -0.06
Nudcd3Q8R1N4 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Nudcd3Q8R1N4 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Nudcd3Q8R1N4 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nudcd3Q8R1N4 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nudcd3Q8R1N4 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC14.67□□□□□ -0.06
Nudcd3Q8R1N4 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Nudcd3Q8R1N4 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nudcd3Q8R1N4 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14.67□□□□□ -0.06
Nudcd3Q8R1N4 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Nudcd3Q8R1N4 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Nudcd3Q8R1N4 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nudcd3Q8R1N4 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nudcd3Q8R1N4 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Nudcd3Q8R1N4 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Nudcd3Q8R1N4 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC14.67□□□□□ -0.06
Nudcd3Q8R1N4 Gm7935-201ENSMUST00000100555 1278 ntBASIC14.67□□□□□ -0.06
Nudcd3Q8R1N4 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Nudcd3Q8R1N4 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC14.67□□□□□ -0.06
Nudcd3Q8R1N4 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nudcd3Q8R1N4 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Nudcd3Q8R1N4 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC14.67□□□□□ -0.06
Nudcd3Q8R1N4 AC164567.1-201ENSMUST00000219185 960 ntBASIC14.67□□□□□ -0.06
Nudcd3Q8R1N4 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nudcd3Q8R1N4 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nudcd3Q8R1N4 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nudcd3Q8R1N4 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Nudcd3Q8R1N4 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nudcd3Q8R1N4 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nudcd3Q8R1N4 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC14.67□□□□□ -0.06
Nudcd3Q8R1N4 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nudcd3Q8R1N4 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nudcd3Q8R1N4 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nudcd3Q8R1N4 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nudcd3Q8R1N4 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
Nudcd3Q8R1N4 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nudcd3Q8R1N4 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nudcd3Q8R1N4 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nudcd3Q8R1N4 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nudcd3Q8R1N4 AC166574.6-201ENSMUST00000227889 1806 ntBASIC14.66□□□□□ -0.06
Nudcd3Q8R1N4 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nudcd3Q8R1N4 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Nudcd3Q8R1N4 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nudcd3Q8R1N4 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nudcd3Q8R1N4 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Nudcd3Q8R1N4 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
Nudcd3Q8R1N4 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nudcd3Q8R1N4 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nudcd3Q8R1N4 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Nudcd3Q8R1N4 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Nudcd3Q8R1N4 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Nudcd3Q8R1N4 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
Nudcd3Q8R1N4 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC14.66□□□□□ -0.06
Nudcd3Q8R1N4 Gm5184-201ENSMUST00000220417 1702 ntBASIC14.66□□□□□ -0.06
Nudcd3Q8R1N4 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nudcd3Q8R1N4 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
Nudcd3Q8R1N4 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nudcd3Q8R1N4 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nudcd3Q8R1N4 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nudcd3Q8R1N4 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Nudcd3Q8R1N4 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Nudcd3Q8R1N4 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nudcd3Q8R1N4 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nudcd3Q8R1N4 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Nudcd3Q8R1N4 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nudcd3Q8R1N4 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nudcd3Q8R1N4 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nudcd3Q8R1N4 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nudcd3Q8R1N4 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC14.65□□□□□ -0.06
Nudcd3Q8R1N4 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC14.65□□□□□ -0.06
Nudcd3Q8R1N4 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC14.65□□□□□ -0.06
Nudcd3Q8R1N4 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nudcd3Q8R1N4 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC14.65□□□□□ -0.06
Nudcd3Q8R1N4 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC14.65□□□□□ -0.06
Nudcd3Q8R1N4 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Nudcd3Q8R1N4 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nudcd3Q8R1N4 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Nudcd3Q8R1N4 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nudcd3Q8R1N4 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Nudcd3Q8R1N4 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC14.65□□□□□ -0.06
Nudcd3Q8R1N4 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nudcd3Q8R1N4 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC14.65□□□□□ -0.06
Nudcd3Q8R1N4 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nudcd3Q8R1N4 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Nudcd3Q8R1N4 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms