Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ebf4Q8K4J2 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ebf4Q8K4J2 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ebf4Q8K4J2 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ebf4Q8K4J2 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
Ebf4Q8K4J2 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
Ebf4Q8K4J2 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ebf4Q8K4J2 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ebf4Q8K4J2 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ebf4Q8K4J2 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ebf4Q8K4J2 Gm11405-201ENSMUST00000118689 1556 ntBASIC13.38□□□□□ -0.27
Ebf4Q8K4J2 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ebf4Q8K4J2 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ebf4Q8K4J2 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ebf4Q8K4J2 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ebf4Q8K4J2 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC13.38□□□□□ -0.27
Ebf4Q8K4J2 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
Ebf4Q8K4J2 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC13.38□□□□□ -0.27
Ebf4Q8K4J2 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Ebf4Q8K4J2 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ebf4Q8K4J2 Gm18622-201ENSMUST00000219361 595 ntBASIC13.38□□□□□ -0.27
Ebf4Q8K4J2 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ebf4Q8K4J2 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Ebf4Q8K4J2 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ebf4Q8K4J2 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ebf4Q8K4J2 Gm45779-201ENSMUST00000212189 4064 ntBASIC13.38□□□□□ -0.27
Ebf4Q8K4J2 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ebf4Q8K4J2 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ebf4Q8K4J2 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ebf4Q8K4J2 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ebf4Q8K4J2 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ebf4Q8K4J2 Gm14451-201ENSMUST00000121581 1542 ntBASIC13.38□□□□□ -0.27
Ebf4Q8K4J2 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ebf4Q8K4J2 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ebf4Q8K4J2 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ebf4Q8K4J2 AC121801.1-201ENSMUST00000225363 1899 ntBASIC13.38□□□□□ -0.27
Ebf4Q8K4J2 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Ebf4Q8K4J2 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ebf4Q8K4J2 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ebf4Q8K4J2 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ebf4Q8K4J2 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ebf4Q8K4J2 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
Ebf4Q8K4J2 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ebf4Q8K4J2 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ebf4Q8K4J2 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ebf4Q8K4J2 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ebf4Q8K4J2 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ebf4Q8K4J2 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ebf4Q8K4J2 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ebf4Q8K4J2 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ebf4Q8K4J2 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ebf4Q8K4J2 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ebf4Q8K4J2 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ebf4Q8K4J2 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC13.37□□□□□ -0.27
Ebf4Q8K4J2 AC134329.2-201ENSMUST00000217897 428 ntBASIC13.37□□□□□ -0.27
Ebf4Q8K4J2 AC122024.2-201ENSMUST00000220086 871 ntBASIC13.37□□□□□ -0.27
Ebf4Q8K4J2 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ebf4Q8K4J2 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ebf4Q8K4J2 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ebf4Q8K4J2 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ebf4Q8K4J2 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ebf4Q8K4J2 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ebf4Q8K4J2 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ebf4Q8K4J2 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ebf4Q8K4J2 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ebf4Q8K4J2 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ebf4Q8K4J2 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Ebf4Q8K4J2 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC13.37□□□□□ -0.27
Ebf4Q8K4J2 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ebf4Q8K4J2 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ebf4Q8K4J2 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ebf4Q8K4J2 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ebf4Q8K4J2 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ebf4Q8K4J2 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ebf4Q8K4J2 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ebf4Q8K4J2 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC13.36□□□□□ -0.27
Ebf4Q8K4J2 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ebf4Q8K4J2 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ebf4Q8K4J2 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Ebf4Q8K4J2 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC13.36□□□□□ -0.27
Ebf4Q8K4J2 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC13.36□□□□□ -0.27
Ebf4Q8K4J2 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC13.36□□□□□ -0.27
Ebf4Q8K4J2 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ebf4Q8K4J2 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Ebf4Q8K4J2 Gm44065-201ENSMUST00000203184 3527 ntBASIC13.36□□□□□ -0.27
Ebf4Q8K4J2 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ebf4Q8K4J2 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ebf4Q8K4J2 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ebf4Q8K4J2 Gm8344-201ENSMUST00000119813 856 ntBASIC13.36□□□□□ -0.27
Ebf4Q8K4J2 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ebf4Q8K4J2 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC13.36□□□□□ -0.27
Ebf4Q8K4J2 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC13.36□□□□□ -0.27
Ebf4Q8K4J2 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ebf4Q8K4J2 AC127349.1-201ENSMUST00000224590 266 ntBASIC13.36□□□□□ -0.27
Ebf4Q8K4J2 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ebf4Q8K4J2 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ebf4Q8K4J2 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Ebf4Q8K4J2 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ebf4Q8K4J2 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ebf4Q8K4J2 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms