Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CopaQ8CIE6 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CopaQ8CIE6 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
CopaQ8CIE6 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CopaQ8CIE6 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CopaQ8CIE6 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CopaQ8CIE6 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CopaQ8CIE6 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
CopaQ8CIE6 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CopaQ8CIE6 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CopaQ8CIE6 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CopaQ8CIE6 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CopaQ8CIE6 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC14.98□□□□□ -0.01
CopaQ8CIE6 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CopaQ8CIE6 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CopaQ8CIE6 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
CopaQ8CIE6 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CopaQ8CIE6 Gm6226-201ENSMUST00000117765 1146 ntBASIC14.98□□□□□ -0.01
CopaQ8CIE6 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC14.98□□□□□ -0.01
CopaQ8CIE6 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CopaQ8CIE6 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC14.98□□□□□ -0.01
CopaQ8CIE6 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC14.98□□□□□ -0.01
CopaQ8CIE6 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CopaQ8CIE6 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CopaQ8CIE6 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CopaQ8CIE6 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CopaQ8CIE6 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CopaQ8CIE6 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CopaQ8CIE6 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
CopaQ8CIE6 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
CopaQ8CIE6 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CopaQ8CIE6 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
CopaQ8CIE6 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC14.98□□□□□ -0.01
CopaQ8CIE6 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
CopaQ8CIE6 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CopaQ8CIE6 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CopaQ8CIE6 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.97□□□□□ -0.01
CopaQ8CIE6 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
CopaQ8CIE6 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
CopaQ8CIE6 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
CopaQ8CIE6 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CopaQ8CIE6 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CopaQ8CIE6 Gm12008-201ENSMUST00000117791 755 ntBASIC14.97□□□□□ -0.01
CopaQ8CIE6 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC14.97□□□□□ -0.01
CopaQ8CIE6 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
CopaQ8CIE6 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC14.97□□□□□ -0.01
CopaQ8CIE6 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CopaQ8CIE6 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC14.97□□□□□ -0.01
CopaQ8CIE6 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CopaQ8CIE6 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CopaQ8CIE6 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CopaQ8CIE6 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CopaQ8CIE6 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
CopaQ8CIE6 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CopaQ8CIE6 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
CopaQ8CIE6 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
CopaQ8CIE6 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CopaQ8CIE6 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CopaQ8CIE6 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
CopaQ8CIE6 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
CopaQ8CIE6 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CopaQ8CIE6 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CopaQ8CIE6 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CopaQ8CIE6 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CopaQ8CIE6 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CopaQ8CIE6 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CopaQ8CIE6 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.96□□□□□ -0.01
CopaQ8CIE6 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CopaQ8CIE6 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
CopaQ8CIE6 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CopaQ8CIE6 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
CopaQ8CIE6 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CopaQ8CIE6 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC14.96□□□□□ -0.01
CopaQ8CIE6 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC14.96□□□□□ -0.01
CopaQ8CIE6 Gm10499-201ENSMUST00000174094 934 ntBASIC14.96□□□□□ -0.01
CopaQ8CIE6 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CopaQ8CIE6 Gm20553-201ENSMUST00000204205 844 ntBASIC14.96□□□□□ -0.01
CopaQ8CIE6 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC14.96□□□□□ -0.01
CopaQ8CIE6 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CopaQ8CIE6 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CopaQ8CIE6 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CopaQ8CIE6 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
CopaQ8CIE6 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CopaQ8CIE6 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC14.96□□□□□ -0.01
CopaQ8CIE6 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CopaQ8CIE6 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CopaQ8CIE6 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CopaQ8CIE6 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14.96□□□□□ -0.01
CopaQ8CIE6 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
CopaQ8CIE6 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CopaQ8CIE6 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC14.96□□□□□ -0.02
CopaQ8CIE6 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
CopaQ8CIE6 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.96□□□□□ -0.02
CopaQ8CIE6 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
CopaQ8CIE6 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CopaQ8CIE6 Nrn1-204ENSMUST00000224323 1779 ntBASIC14.96□□□□□ -0.02
CopaQ8CIE6 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
CopaQ8CIE6 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CopaQ8CIE6 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CopaQ8CIE6 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms