Protein–RNA interactions for Protein: Q8CEF8

Rnf222, RING finger protein 222, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf222Q8CEF8 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf222Q8CEF8 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf222Q8CEF8 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf222Q8CEF8 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf222Q8CEF8 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf222Q8CEF8 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf222Q8CEF8 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf222Q8CEF8 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC14.28□□□□□ -0.12
Rnf222Q8CEF8 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf222Q8CEF8 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf222Q8CEF8 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf222Q8CEF8 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
Rnf222Q8CEF8 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf222Q8CEF8 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf222Q8CEF8 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf222Q8CEF8 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf222Q8CEF8 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf222Q8CEF8 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf222Q8CEF8 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf222Q8CEF8 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf222Q8CEF8 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Rnf222Q8CEF8 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rnf222Q8CEF8 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rnf222Q8CEF8 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rnf222Q8CEF8 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rnf222Q8CEF8 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rnf222Q8CEF8 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Rnf222Q8CEF8 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rnf222Q8CEF8 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Rnf222Q8CEF8 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Rnf222Q8CEF8 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Rnf222Q8CEF8 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rnf222Q8CEF8 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rnf222Q8CEF8 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rnf222Q8CEF8 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Rnf222Q8CEF8 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rnf222Q8CEF8 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rnf222Q8CEF8 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Rnf222Q8CEF8 Dupd1-202ENSMUST00000224735 548 ntBASIC14.27□□□□□ -0.13
Rnf222Q8CEF8 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Rnf222Q8CEF8 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rnf222Q8CEF8 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Rnf222Q8CEF8 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rnf222Q8CEF8 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Rnf222Q8CEF8 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Rnf222Q8CEF8 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rnf222Q8CEF8 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rnf222Q8CEF8 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rnf222Q8CEF8 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rnf222Q8CEF8 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rnf222Q8CEF8 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rnf222Q8CEF8 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rnf222Q8CEF8 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Rnf222Q8CEF8 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Rnf222Q8CEF8 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rnf222Q8CEF8 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rnf222Q8CEF8 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf222Q8CEF8 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
Rnf222Q8CEF8 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf222Q8CEF8 Gm5320-201ENSMUST00000207163 1519 ntBASIC14.26□□□□□ -0.13
Rnf222Q8CEF8 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf222Q8CEF8 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf222Q8CEF8 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf222Q8CEF8 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf222Q8CEF8 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf222Q8CEF8 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf222Q8CEF8 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf222Q8CEF8 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf222Q8CEF8 Gm7775-201ENSMUST00000218871 853 ntBASIC14.26□□□□□ -0.13
Rnf222Q8CEF8 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf222Q8CEF8 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf222Q8CEF8 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf222Q8CEF8 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf222Q8CEF8 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf222Q8CEF8 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf222Q8CEF8 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf222Q8CEF8 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf222Q8CEF8 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf222Q8CEF8 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf222Q8CEF8 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf222Q8CEF8 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf222Q8CEF8 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf222Q8CEF8 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf222Q8CEF8 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf222Q8CEF8 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.26□□□□□ -0.13
Rnf222Q8CEF8 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf222Q8CEF8 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf222Q8CEF8 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf222Q8CEF8 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf222Q8CEF8 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Rnf222Q8CEF8 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf222Q8CEF8 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf222Q8CEF8 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf222Q8CEF8 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf222Q8CEF8 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf222Q8CEF8 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Rnf222Q8CEF8 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf222Q8CEF8 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf222Q8CEF8 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf222Q8CEF8 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms