Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Prpf31Q8CCF0 Gm4691-201ENSMUST00000182339 1000 ntBASIC16.04■□□□□ 0.16
Prpf31Q8CCF0 Gm37277-201ENSMUST00000194052 1111 ntBASIC16.04■□□□□ 0.16
Prpf31Q8CCF0 Gm2451-201ENSMUST00000199447 999 ntBASIC16.04■□□□□ 0.16
Prpf31Q8CCF0 Gm10290-201ENSMUST00000200451 999 ntBASIC16.04■□□□□ 0.16
Prpf31Q8CCF0 Gm45098-201ENSMUST00000207179 657 ntBASIC16.04■□□□□ 0.16
Prpf31Q8CCF0 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Prpf31Q8CCF0 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Prpf31Q8CCF0 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Prpf31Q8CCF0 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Prpf31Q8CCF0 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Prpf31Q8CCF0 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Prpf31Q8CCF0 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC16.04■□□□□ 0.16
Prpf31Q8CCF0 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Prpf31Q8CCF0 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Prpf31Q8CCF0 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Prpf31Q8CCF0 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Prpf31Q8CCF0 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Prpf31Q8CCF0 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Prpf31Q8CCF0 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Prpf31Q8CCF0 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
Prpf31Q8CCF0 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC16.04■□□□□ 0.16
Prpf31Q8CCF0 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Prpf31Q8CCF0 Gm13517-201ENSMUST00000120782 1495 ntBASIC16.03■□□□□ 0.16
Prpf31Q8CCF0 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Prpf31Q8CCF0 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Prpf31Q8CCF0 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Prpf31Q8CCF0 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC16.03■□□□□ 0.16
Prpf31Q8CCF0 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Prpf31Q8CCF0 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC16.03■□□□□ 0.16
Prpf31Q8CCF0 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
Prpf31Q8CCF0 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Prpf31Q8CCF0 Gm18766-201ENSMUST00000189811 808 ntBASIC16.03■□□□□ 0.16
Prpf31Q8CCF0 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC16.03■□□□□ 0.16
Prpf31Q8CCF0 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Prpf31Q8CCF0 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Prpf31Q8CCF0 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
Prpf31Q8CCF0 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Prpf31Q8CCF0 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC16.03■□□□□ 0.16
Prpf31Q8CCF0 Gm29340-201ENSMUST00000188763 3854 ntBASIC16.03■□□□□ 0.16
Prpf31Q8CCF0 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Prpf31Q8CCF0 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Prpf31Q8CCF0 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Prpf31Q8CCF0 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC16.02■□□□□ 0.16
Prpf31Q8CCF0 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Prpf31Q8CCF0 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Prpf31Q8CCF0 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
Prpf31Q8CCF0 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Prpf31Q8CCF0 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Prpf31Q8CCF0 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Prpf31Q8CCF0 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Prpf31Q8CCF0 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Prpf31Q8CCF0 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Prpf31Q8CCF0 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC16.02■□□□□ 0.16
Prpf31Q8CCF0 Gm9726-201ENSMUST00000180321 678 ntBASIC16.02■□□□□ 0.16
Prpf31Q8CCF0 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Prpf31Q8CCF0 AC158982.1-201ENSMUST00000228377 901 ntBASIC16.02■□□□□ 0.16
Prpf31Q8CCF0 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Prpf31Q8CCF0 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Prpf31Q8CCF0 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Prpf31Q8CCF0 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Prpf31Q8CCF0 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Prpf31Q8CCF0 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Prpf31Q8CCF0 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Prpf31Q8CCF0 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Prpf31Q8CCF0 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Prpf31Q8CCF0 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Prpf31Q8CCF0 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC16.01■□□□□ 0.15
Prpf31Q8CCF0 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Prpf31Q8CCF0 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Prpf31Q8CCF0 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Prpf31Q8CCF0 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Prpf31Q8CCF0 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Prpf31Q8CCF0 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Prpf31Q8CCF0 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Prpf31Q8CCF0 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Prpf31Q8CCF0 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Prpf31Q8CCF0 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC16.01■□□□□ 0.15
Prpf31Q8CCF0 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Prpf31Q8CCF0 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
Prpf31Q8CCF0 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Prpf31Q8CCF0 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
Prpf31Q8CCF0 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Prpf31Q8CCF0 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Prpf31Q8CCF0 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Prpf31Q8CCF0 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Prpf31Q8CCF0 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Prpf31Q8CCF0 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Prpf31Q8CCF0 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Prpf31Q8CCF0 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Prpf31Q8CCF0 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Prpf31Q8CCF0 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Prpf31Q8CCF0 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC16■□□□□ 0.15
Prpf31Q8CCF0 Gm6539-201ENSMUST00000119157 1064 ntBASIC16■□□□□ 0.15
Prpf31Q8CCF0 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC16■□□□□ 0.15
Prpf31Q8CCF0 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC16■□□□□ 0.15
Prpf31Q8CCF0 Gm27618-201ENSMUST00000183671 60 ntBASIC16■□□□□ 0.15
Prpf31Q8CCF0 Olfr286-202ENSMUST00000205305 969 ntBASIC16■□□□□ 0.15
Prpf31Q8CCF0 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC16■□□□□ 0.15
Prpf31Q8CCF0 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC16■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms