Protein–RNA interactions for Protein: Q8CC35

Synpo, Synaptopodin, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynpoQ8CC35 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.2□□□□□ -0.14
SynpoQ8CC35 Gm14722-201ENSMUST00000118943 689 ntBASIC14.2□□□□□ -0.14
SynpoQ8CC35 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC14.2□□□□□ -0.14
SynpoQ8CC35 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SynpoQ8CC35 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SynpoQ8CC35 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
SynpoQ8CC35 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC14.2□□□□□ -0.14
SynpoQ8CC35 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC14.2□□□□□ -0.14
SynpoQ8CC35 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
SynpoQ8CC35 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SynpoQ8CC35 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SynpoQ8CC35 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
SynpoQ8CC35 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC14.2□□□□□ -0.14
SynpoQ8CC35 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
SynpoQ8CC35 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SynpoQ8CC35 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SynpoQ8CC35 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC14.2□□□□□ -0.14
SynpoQ8CC35 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.19□□□□□ -0.14
SynpoQ8CC35 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SynpoQ8CC35 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SynpoQ8CC35 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
SynpoQ8CC35 Camk2g-217ENSMUST00000226630 1937 ntBASIC14.19□□□□□ -0.14
SynpoQ8CC35 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SynpoQ8CC35 AC157650.3-201ENSMUST00000225058 1476 ntBASIC14.19□□□□□ -0.14
SynpoQ8CC35 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.19□□□□□ -0.14
SynpoQ8CC35 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SynpoQ8CC35 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SynpoQ8CC35 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SynpoQ8CC35 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SynpoQ8CC35 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SynpoQ8CC35 Gm15427-201ENSMUST00000117288 531 ntBASIC14.19□□□□□ -0.14
SynpoQ8CC35 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC14.19□□□□□ -0.14
SynpoQ8CC35 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC14.19□□□□□ -0.14
SynpoQ8CC35 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SynpoQ8CC35 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SynpoQ8CC35 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC14.19□□□□□ -0.14
SynpoQ8CC35 Thap2-203ENSMUST00000218989 527 ntBASIC14.19□□□□□ -0.14
SynpoQ8CC35 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SynpoQ8CC35 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SynpoQ8CC35 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SynpoQ8CC35 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SynpoQ8CC35 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
SynpoQ8CC35 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SynpoQ8CC35 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SynpoQ8CC35 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SynpoQ8CC35 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SynpoQ8CC35 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SynpoQ8CC35 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
SynpoQ8CC35 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
SynpoQ8CC35 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
SynpoQ8CC35 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SynpoQ8CC35 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SynpoQ8CC35 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SynpoQ8CC35 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SynpoQ8CC35 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SynpoQ8CC35 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SynpoQ8CC35 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SynpoQ8CC35 Gm45779-201ENSMUST00000212189 4064 ntBASIC14.18□□□□□ -0.14
SynpoQ8CC35 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC14.18□□□□□ -0.14
SynpoQ8CC35 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SynpoQ8CC35 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SynpoQ8CC35 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
SynpoQ8CC35 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SynpoQ8CC35 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SynpoQ8CC35 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SynpoQ8CC35 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SynpoQ8CC35 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC14.18□□□□□ -0.14
SynpoQ8CC35 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SynpoQ8CC35 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC14.18□□□□□ -0.14
SynpoQ8CC35 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
SynpoQ8CC35 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
SynpoQ8CC35 Gm8318-201ENSMUST00000182954 872 ntBASIC14.18□□□□□ -0.14
SynpoQ8CC35 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC14.18□□□□□ -0.14
SynpoQ8CC35 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC14.18□□□□□ -0.14
SynpoQ8CC35 Gm45747-201ENSMUST00000212203 999 ntBASIC14.18□□□□□ -0.14
SynpoQ8CC35 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC14.18□□□□□ -0.14
SynpoQ8CC35 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SynpoQ8CC35 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SynpoQ8CC35 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SynpoQ8CC35 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.18□□□□□ -0.14
SynpoQ8CC35 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
SynpoQ8CC35 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SynpoQ8CC35 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
SynpoQ8CC35 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
SynpoQ8CC35 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SynpoQ8CC35 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC14.18□□□□□ -0.14
SynpoQ8CC35 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SynpoQ8CC35 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SynpoQ8CC35 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SynpoQ8CC35 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
SynpoQ8CC35 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.17□□□□□ -0.14
SynpoQ8CC35 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
SynpoQ8CC35 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.17□□□□□ -0.14
SynpoQ8CC35 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.17□□□□□ -0.14
SynpoQ8CC35 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SynpoQ8CC35 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
SynpoQ8CC35 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SynpoQ8CC35 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SynpoQ8CC35 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SynpoQ8CC35 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms