Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Alx1Q8C8B0 Gm15920-201ENSMUST00000118998 402 ntBASIC17.08■□□□□ 0.32
Alx1Q8C8B0 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Alx1Q8C8B0 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC17.08■□□□□ 0.32
Alx1Q8C8B0 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC17.08■□□□□ 0.32
Alx1Q8C8B0 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Alx1Q8C8B0 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Alx1Q8C8B0 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC17.08■□□□□ 0.32
Alx1Q8C8B0 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Alx1Q8C8B0 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Alx1Q8C8B0 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Alx1Q8C8B0 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
Alx1Q8C8B0 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Alx1Q8C8B0 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Alx1Q8C8B0 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Alx1Q8C8B0 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Alx1Q8C8B0 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Alx1Q8C8B0 AC162938.1-201ENSMUST00000213140 2323 ntBASIC17.07■□□□□ 0.32
Alx1Q8C8B0 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Alx1Q8C8B0 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Alx1Q8C8B0 Gm9719-201ENSMUST00000162765 543 ntBASIC17.07■□□□□ 0.32
Alx1Q8C8B0 Gm37277-201ENSMUST00000194052 1111 ntBASIC17.07■□□□□ 0.32
Alx1Q8C8B0 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Alx1Q8C8B0 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Alx1Q8C8B0 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Alx1Q8C8B0 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Alx1Q8C8B0 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Alx1Q8C8B0 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Alx1Q8C8B0 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Alx1Q8C8B0 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Alx1Q8C8B0 Gm9856-201ENSMUST00000217077 2578 ntBASIC17.07■□□□□ 0.32
Alx1Q8C8B0 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Alx1Q8C8B0 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC17.07■□□□□ 0.32
Alx1Q8C8B0 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Alx1Q8C8B0 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Alx1Q8C8B0 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Alx1Q8C8B0 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Alx1Q8C8B0 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Alx1Q8C8B0 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Alx1Q8C8B0 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Alx1Q8C8B0 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Alx1Q8C8B0 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Alx1Q8C8B0 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Alx1Q8C8B0 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Alx1Q8C8B0 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Alx1Q8C8B0 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Alx1Q8C8B0 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Alx1Q8C8B0 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC17.06■□□□□ 0.32
Alx1Q8C8B0 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Alx1Q8C8B0 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Alx1Q8C8B0 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Alx1Q8C8B0 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Alx1Q8C8B0 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Alx1Q8C8B0 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Alx1Q8C8B0 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Alx1Q8C8B0 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC17.06■□□□□ 0.32
Alx1Q8C8B0 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Alx1Q8C8B0 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Alx1Q8C8B0 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Alx1Q8C8B0 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
Alx1Q8C8B0 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Alx1Q8C8B0 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Alx1Q8C8B0 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Alx1Q8C8B0 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
Alx1Q8C8B0 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Alx1Q8C8B0 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Alx1Q8C8B0 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Alx1Q8C8B0 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Alx1Q8C8B0 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Alx1Q8C8B0 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Alx1Q8C8B0 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC17.05■□□□□ 0.32
Alx1Q8C8B0 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Alx1Q8C8B0 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Alx1Q8C8B0 Gm27618-201ENSMUST00000183671 60 ntBASIC17.05■□□□□ 0.32
Alx1Q8C8B0 Gm27622-201ENSMUST00000183779 60 ntBASIC17.05■□□□□ 0.32
Alx1Q8C8B0 Gm27631-201ENSMUST00000184163 466 ntBASIC17.05■□□□□ 0.32
Alx1Q8C8B0 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC17.05■□□□□ 0.32
Alx1Q8C8B0 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Alx1Q8C8B0 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Alx1Q8C8B0 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Alx1Q8C8B0 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Alx1Q8C8B0 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Alx1Q8C8B0 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Alx1Q8C8B0 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Alx1Q8C8B0 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Alx1Q8C8B0 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC17.04■□□□□ 0.32
Alx1Q8C8B0 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Alx1Q8C8B0 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Alx1Q8C8B0 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Alx1Q8C8B0 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Alx1Q8C8B0 Gm12428-201ENSMUST00000119844 727 ntBASIC17.04■□□□□ 0.32
Alx1Q8C8B0 Gm6222-201ENSMUST00000120787 396 ntBASIC17.04■□□□□ 0.32
Alx1Q8C8B0 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC17.04■□□□□ 0.32
Alx1Q8C8B0 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Alx1Q8C8B0 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Alx1Q8C8B0 Mir6956-201ENSMUST00000183598 62 ntBASIC17.04■□□□□ 0.32
Alx1Q8C8B0 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Alx1Q8C8B0 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Alx1Q8C8B0 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Alx1Q8C8B0 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms